Protein Alignment al and shox

DIOPT Version :10

• Sequence 1: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Sequence 2: XP_004911874.1
• Gene: shox / 100486480
• XenbaseID: XB-GENE-920752
• Length: 334
• Species: Xenopus tropicalis
• Alignment Length: 357
• Identity: 101/357 - (28%)
• Similarity: 129/357 - (36%)
• Gaps: 146/357 - (40%)

  Fly    51 GAPSGASGASGGTNSPVSDGNSDC---------EADEYAPKRKQRRYRTTFTSFQLEELEKAFSR 106
            ||.|.........::.||:|..:|         |.::...|.||||.||.||..||.|||:.|..
 Frog   113 GADSDKDKLKDYGSTRVSEGIYECKEKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDE 177

  Fly   107 THYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHP--YNPYLPGGAATMQTVVG 169
            |||||.|.||||:.::||:|||:||||||||||.||||.   |.|.  |...| |..:.::|...
 Frog   178 THYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQEN---QMHKGGYGVIL-GTGSHLETCRV 238

  Fly   170 AALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMY 234
            |     |:.::| .||.||. |..|.|......|                 |.||:.||..|
 Frog   239 A-----PYVNMG-ALRMPFQ-QVQAQLQLEGVAH-----------------AHPHLHPHLAA--- 276

  Fly   235 SPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHP 299
                                               |:|..|.                      |
 Frog   277 -----------------------------------HAPYLMF----------------------P 284

  Fly   300 PPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPP 364
            |||...|                        .:||:.|.::...:
 Frog   285 PPPFGLP------------------------IASLADTASAAAVV-------------------- 305

  Fly   365 PPRAATPPEDRRTSSIAALRLKAREHELKLEL 396
               ||....:.:.||||.||||||:|...|.|
 Frog   306 ---AAAAKSNSKNSSIADLRLKARKHAEALGL 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
al	NP_722629.1	Homeodomain	86..142	CDD:459649	37/55 (67%)
		OAR	374..391	CDD:461067	10/16 (63%)
shox	XP_004911874.1	Homeodomain	157..213	CDD:459649	37/55 (67%)
		OAR	314..330	CDD:461067	11/15 (73%)