DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and arxb

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_002667096.1 Gene:arxb / 100329907 ZFINID:ZDB-GENE-121109-2 Length:385 Species:Danio rerio


Alignment Length:461 Identity:131/461 - (28%)
Similarity:178/461 - (38%) Gaps:188/461 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGISEEIKLEELPQEAKLAHPDA----------VVLVDRAPGSSAASAGAAL------------- 42
            :|....:|::|.|......||..          ..|.|   .|:..:||..|             
Zfish    32 LGRKSPLKVQETPHSLWPLHPHMHLPPKLRRPFAPLTD---SSTDETAGPRLLQTACEKLKITEA 93

  Fly    43 -TVSMSVSGGAPSGAS----------GAS--GGT-------------NSPVSDGNSDCEADEYAP 81
             .|::|.:|.....||          ||.  |.|             ||..:..::..:.::...
Zfish    94 SIVNISRAGSYQEHASCKNTPINEEEGADICGETNVTLKQEREAFLKNSEETSLSAGSDTEDGML 158

  Fly    82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV 146
            |||||||||||||:||||||:||.:||||||||||||||::.|||||:|||||||||||||:|||
Zfish   159 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKV 223

  Fly   147 GPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIP 211
            |.|.|..:.:..|.....|::.                       |          :||..|.:|
Zfish   224 GVQPHTLSLHYSGAPPAAQSLC-----------------------H----------YLSGNPFVP 255

  Fly   212 SGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHML 276
            :              ||                               ||:....|   :|...|
Zfish   256 N--------------PH-------------------------------PAIDSAWP---APFQRL 272

  Fly   277 ASPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSP----- 336
            |.|..:..|             ||...|                 |:|.|:.:..:..:|     
Zfish   273 AQPAQNSVS-------------PPGFSA-----------------LLGAAMFRHPAFFNPTFGRL 307

  Fly   337 -TQTSPVALTLSHSPQRQLPPPSHQAP------------PPPPRAATPPEDRRTSSIAALRLKAR 388
             |...|:||       :::|.|:.:.|            ..||..::|..|.|.||||||||||:
Zfish   308 FTSLGPMAL-------QRIPLPAIEGPIQRSHLTTSLLSSSPPLPSSPTVDLRASSIAALRLKAK 365

  Fly   389 EHELKL 394
            ||..:|
Zfish   366 EHSAQL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 43/51 (84%)
OAR 374..391 CDD:281777 13/16 (81%)
arxbXP_002667096.1 Homeobox 166..218 CDD:278475 43/51 (84%)
OAR 351..368 CDD:281777 13/16 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 110 1.000 Domainoid score I6248
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26023
orthoMCL 1 0.900 - - OOG6_108797
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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