DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11911 and svh-1

DIOPT Version :10

Sequence 1:NP_608518.1 Gene:CG11911 / 33206 FlyBaseID:FBgn0031249 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:242 Identity:70/242 - (28%)
Similarity:118/242 - (48%) Gaps:18/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VINGTEAEPHSAPYIVSLATNYLKHSHICGGTLINKDWIVTAAHCISEPVGMS---IIAGLHTRA 98
            |:.|.|..|.:.|:..:|.....| :|.||.::::|..::|||||..|...:|   ::.|.....
 Worm   713 VVGGFETVPGAFPWTAALRNKATK-AHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNN 776

  Fly    99 EVD---ELTQQRQVDFGRVHEKYTGGVGPYDIALLHVNESFI-FNEWVQPATLPSREQVHE--GE 157
            :.|   ::...:::.|..:::    .:..:|||:|.:....| |||:.||..|||::.|:.  .:
 Worm   777 QTDGNEQIFYLQRIHFYPLYK----DIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQ 837

  Fly   158 THLYGWGQPKSYIFSGAKTLQTVTTQILNYEECKEELPESAPIAESNICSSSLQQSKSACNGDSG 222
            ..:.|||   |.....|:.||.....|:|..:|.......:.::.|..|:..|:....:|.||||
 Worm   838 CVVSGWG---SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSG 899

  Fly   223 GPLVVEFTNAPSELIGIVSWGYIPCGLANMPSIYTKVSAYIDWITNI 269
            ||......:....|.|::||| ..|.....|.|||.|:.|:.||:.|
 Worm   900 GPFACRREDGAFVLAGVISWG-DGCAQKKQPGIYTMVAPYLSWISAI 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11911NP_608518.1 Tryp_SPc 37..266 CDD:214473 67/237 (28%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 69/240 (29%)
Blue background indicates that the domain is not in the aligned region.

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