DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11912 and Ovch2

DIOPT Version :10

Sequence 1:NP_608517.1 Gene:CG11912 / 33205 FlyBaseID:FBgn0031248 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:290 Identity:83/290 - (28%)
Similarity:126/290 - (43%) Gaps:50/290 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ASVSAISVPQPG------FPE------GRIINGYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVT 65
            |::|:|..|..|      :|:      .||:.|.:..||..|:.|||: ....|.|.|:::....
  Rat    23 ATLSSIRAPDCGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLK-QKQKHICGGTIISSQW 86

  Fly    66 IVTAAHC-------LTYNQGQAVAGAHSRTDQENVQIRKFTNAQYVIHENYGGGVGPNDIGLILL 123
            ::|||||       ||.|   ..||.|..:..|..: :.......:||..: ....|.:..:.||
  Rat    87 VITAAHCMANRNIALTLN---VTAGEHDLSQAEPGE-QTLAIETIIIHPQF-STKKPMNYDIALL 146

  Fly   124 KEEDAFDLNAVARDGSNPVSAVSLPSKTFQGTSDGYL---YGWGR-DNSGLLPLNLQKLDAIIVD 184
            |....|......|    || .:..|.:.|..   ||:   .|||| ...|.||..||:::..|:.
  Rat   147 KMVGTFQFGQFVR----PV-CLPEPGEQFNA---GYICTTAGWGRLSEGGSLPQVLQQVNLPILT 203

  Fly   185 YNECKAALPS--NNSLAETNVCTHTPGKADGSCNGDSGGPLVSQSSSRGAELIGIVSWGYTPC-- 245
            :.||:|.:.:  |....:|.:||.:|.....:|.|||||.|:.|:......|.|:.||| ..|  
  Rat   204 HEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWG-LGCGR 267

  Fly   246 --------LSTTYPSVYTSVSSFLPWIDEN 267
                    .....|.::|.:...||||.|:
  Rat   268 SWRNNARKKEQGSPGIFTDLRRVLPWIHEH 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11912NP_608517.1 Tryp_SPc 29..264 CDD:214473 74/257 (29%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 75/259 (29%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.