DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11912 and F12

DIOPT Version :10

Sequence 1:NP_608517.1 Gene:CG11912 / 33205 FlyBaseID:FBgn0031248 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:250 Identity:73/250 - (29%)
Similarity:113/250 - (45%) Gaps:21/250 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIINGYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCLTYN---QGQAVAGAHSRTDQ 90
            |::.|..|..|..|||.:|..  ...||||||:|...::||||||...   :...|.....|.:|
  Rat   361 RVVGGLVALPGSHPYIAALYW--GDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHNQ 423

  Fly    91 ENVQIRKFTNAQYVIHENYGGGVGPNDIGLILLKEEDAFDLNAVARDGSNPV---SAVSLPSKTF 152
            ...:.:......|.:||.:......:|:.|:.|:...  :..|:......||   |:.:.||:|.
  Rat   424 SCERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRK--NSCAILSPHVQPVCLPSSAAPPSETV 486

  Fly   153 QGTSDGYLYGWGRDNSGL--LPLNLQKLDAIIVDYNECKAALPSNNSLAETNVCT-HTPGKADGS 214
            ...    :.|||....|.  ....||:.....:..:.|.::....:::....:|. ...|.|| :
  Rat   487 LCE----VAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVHGDAILPGMLCAGFLEGGAD-A 546

  Fly   215 CNGDSGGPLVSQS--SSRGAELIGIVSWGYTPCLSTTYPSVYTSVSSFLPWIDEN 267
            |.||||||||...  :.|...|.|::||| :.|.....|.|||.|:::|.||.|:
  Rat   547 CQGDSGGPLVCDEGVTERQLTLRGVISWG-SGCGDRNKPGVYTDVANYLDWIQEH 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11912NP_608517.1 Tryp_SPc 29..264 CDD:214473 70/245 (29%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 71/247 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.