DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11912 and Tmprss2

DIOPT Version :10

Sequence 1:NP_608517.1 Gene:CG11912 / 33205 FlyBaseID:FBgn0031248 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:265 Identity:78/265 - (29%)
Similarity:111/265 - (41%) Gaps:60/265 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EGRIINGYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCL----------TYNQG--- 78
            :.||:.|..|:.|:.|:.|||. ....|.|.||::....|||||||:          |...|   
  Rat   251 QSRIVGGSTASPGDWPWQVSLH-VQGIHVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILK 314

  Fly    79 QAVAGAHSRTDQENVQIRKFTNAQYVIHENYGGGVGPNDIGLILLKEEDAFDLNAVARDGSNPVS 143
            |::....||...|.|          :.|.||......|||.|:.|:...||:      |...|| 
  Rat   315 QSLMFYGSRHQVEKV----------ISHPNYDSKTKNNDIALMKLQTPLAFN------DVVKPV- 362

  Fly   144 AVSLPSKTFQGTSDGYLYGWGRD----------NSGLLPLNLQKLDAIIVDYNECKAALPSNNSL 198
            .:..|........:.::.|||..          |:.::||         ::.::|.:....||.:
  Rat   363 CLPNPGMMLDLAQECWISGWGATYEKGKTSDVLNAAMVPL---------IEPSKCNSKYIYNNLI 418

  Fly   199 AETNVCT-HTPGKADGSCNGDSGGPLVSQSSSRGAE---LIGIVSWGYTPCLSTTYPSVYTSVSS 259
            ....:|. ...|..| ||.||||||||:..:    |   |||..||| :.|.....|.||.:|:.
  Rat   419 TPAMICAGFLQGSVD-SCQGDSGGPLVTLKN----EIWWLIGDTSWG-SGCAKAYRPGVYGNVTV 477

  Fly   260 FLPWI 264
            |..||
  Rat   478 FTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11912NP_608517.1 Tryp_SPc 29..264 CDD:214473 76/261 (29%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 77/262 (29%)
Blue background indicates that the domain is not in the aligned region.

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