DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11912 and tmprss2.12

DIOPT Version :10

Sequence 1:NP_608517.1 Gene:CG11912 / 33205 FlyBaseID:FBgn0031248 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_031752400.1 Gene:tmprss2.12 / 100497514 XenbaseID:XB-GENE-22065925 Length:497 Species:Xenopus tropicalis


Alignment Length:263 Identity:74/263 - (28%)
Similarity:127/263 - (48%) Gaps:26/263 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LASVSAISVPQPGFPEGRIINGYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCLTYN 76
            :.|:..|......:.|.||:.|..|:.|:.|:.|:|| ..:::.|.||::....|||||||:   
 Frog   243 VVSLKCIDCGLSTYGESRIVGGSSASIGDWPWQVNLQ-YDDTNLCGGSVIAANWIVTAAHCV--- 303

  Fly    77 QGQAVAGAHSRTDQENVQIRKFTNA------QYVIHENYGGGVGPNDIGLILLKEEDAFDLNAVA 135
            ||...:.:..:.....:::..:.::      :.::|.:|......|||.|:.||...||  ::::
 Frog   304 QGDTSSPSLWKAFIGKIKMPSYYDSSAYSVDRIIVHPDYSSQTNSNDIALMKLKTSIAF--SSIS 366

  Fly   136 RDGSNPVSAVSLPSKTFQGTSDG---YLYGWG-RDNSGLLPLNLQKLDAIIVDYNECKAALPSNN 196
            |       .|.||:...| ..:|   |:.||| ....|.:...|:.....::....|...:..|.
 Frog   367 R-------PVCLPNYGMQ-WEEGQPCYISGWGTTSQKGSISSVLKYAMVPLISPTTCNQTIMYNG 423

  Fly   197 SLAETNVCTHTPGKADGSCNGDSGGPLVSQSSSRGAELIGIVSWGYTPCLSTTYPSVYTSVSSFL 261
            ::..:.:|...|.....||.||||||||::::|.. .|:|..||| ..|.:...|.||.:::.||
 Frog   424 AITSSMICAGYPKGGVDSCQGDSGGPLVTKTNSLW-WLVGDTSWG-DGCANVYRPGVYGNMTVFL 486

  Fly   262 PWI 264
            .||
 Frog   487 QWI 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11912NP_608517.1 Tryp_SPc 29..264 CDD:214473 69/244 (28%)
tmprss2.12XP_031752400.1 LDLa 127..155 CDD:238060
SRCR_2 160..255 CDD:464747 2/11 (18%)
Tryp_SPc 261..489 CDD:238113 68/243 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.