DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stip1 and ttc12

DIOPT Version :9

Sequence 1:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_009289931.1 Gene:ttc12 / 563791 ZFINID:ZDB-GENE-071016-4 Length:707 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stip1NP_477354.1 TPR_11 6..69 CDD:290150
TPR repeat 7..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR_11 40..103 CDD:290150
TPR repeat 72..100 CDD:276809
TPR_11 175..237 CDD:290150
TPR repeat 175..203 CDD:276809
TPR_1 181..208 CDD:278916
TPR_12 205..278 CDD:290160
TPR repeat 208..238 CDD:276809
TPR repeat 250..278 CDD:276809
TPR_1 250..>276 CDD:278916
TPR_11 309..375 CDD:290150
TPR repeat 310..338 CDD:276809
TPR_1 <317..343 CDD:278916
TPR repeat 343..373 CDD:276809
TPR_1 378..411 CDD:278916
TPR repeat 378..406 CDD:276809
STI1 439..478 CDD:128966
ttc12XP_009289931.1 TPR_11 112..178 CDD:290150
TPR repeat 113..141 CDD:276809
TPR repeat 146..176 CDD:276809
TPR_11 149..212 CDD:290150
TPR_1 150..180 CDD:278916
TPR repeat 181..209 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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