DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stip1 and SUGT1

DIOPT Version :9

Sequence 1:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001124384.1 Gene:SUGT1 / 10910 HGNCID:16987 Length:365 Species:Homo sapiens


Alignment Length:387 Identity:75/387 - (19%)
Similarity:137/387 - (35%) Gaps:99/387 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QALSAEKFDE----AVAAYTEAIALDDQNHVLYSNRSAAFAKAGKFQEALEDAEKTIQLNPTWPK 73
            |:.|....||    |:...|:|:.....:...|..|:......|.:..|:.||:|:::|||....
Human    16 QSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNST 80

  Fly    74 GYSRKGAAAAGLNDFMKAFEAYNEGLKYDPTNAILLQGRMETTASALSFMQSQGDIPMDVDPQQA 138
            ...|||.......::..|.|.:.||.|.|     :..|......:.|..:.|             
Human    81 AMLRKGICEYHEKNYAAALETFTEGQKLD-----IETGFHRVGQAGLQLLTS------------- 127

  Fly   139 RSRRAPSPPPAKPAEPPKPAEPRVEDMTEEQKN-KYFARKEKELGNAAYKKKDFETALKHYHAAI 202
                  |.|||        .:.:...:|....| ..:.::.:|..|.:      |:.:..:.:.|
Human   128 ------SDPPA--------LDSQSAGITGADANFSVWIKRCQEAQNGS------ESEVWTHQSKI 172

  Fly   203 EHD--PTD----ITF-----YNNIAAVHFERKEYEECIKQCEKGIEVGRESRADFKLI-----AK 251
            ::|  .|:    ||.     ..|...|.|..||....:|     :..|.:.....:|:     .:
Human   173 KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVK-----LPSGEDYNLKLELLHPIIPEQ 232

  Fly   252 SFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVE-----------------AKIKEE 299
            |..::.:|..:::..|...|.:||...:...|..|..:::|:                 .:||||
Human   233 STFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEE 297

  Fly   300 ER-------------MAYINPEKAEEEKEQGNLFFKKGDYSTAVKHYTEAIKRN-----PDD 343
            |:             ...|..:.::|.|...|..|.:...:....::::..||.     |||
Human   298 EKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDD 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stip1NP_477354.1 TPR_11 6..69 CDD:290150 15/59 (25%)
TPR repeat 7..32 CDD:276809 7/22 (32%)
TPR repeat 37..67 CDD:276809 7/29 (24%)
TPR_11 40..103 CDD:290150 18/62 (29%)
TPR repeat 72..100 CDD:276809 7/27 (26%)
TPR_11 175..237 CDD:290150 14/72 (19%)
TPR repeat 175..203 CDD:276809 3/27 (11%)
TPR_1 181..208 CDD:278916 4/28 (14%)
TPR_12 205..278 CDD:290160 18/88 (20%)
TPR repeat 208..238 CDD:276809 8/38 (21%)
TPR repeat 250..278 CDD:276809 6/27 (22%)
TPR_1 250..>276 CDD:278916 5/25 (20%)
TPR_11 309..375 CDD:290150 9/40 (23%)
TPR repeat 310..338 CDD:276809 4/27 (15%)
TPR_1 <317..343 CDD:278916 5/30 (17%)
TPR repeat 343..373 CDD:276809 1/1 (100%)
TPR_1 378..411 CDD:278916
TPR repeat 378..406 CDD:276809
STI1 439..478 CDD:128966
SUGT1NP_001124384.1 TPR 1 11..44 7/27 (26%)
PLN03088 21..365 CDD:215568 73/382 (19%)
TPR repeat 44..74 CDD:276809 7/29 (24%)
TPR 2 45..78 10/32 (31%)
TPR 3 79..112 9/37 (24%)
TPR repeat 79..107 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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