DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2af38 and AT3G44785

DIOPT Version :10

Sequence 1:NP_477208.1 Gene:U2af38 / 33201 FlyBaseID:FBgn0017457 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_974385.1 Gene:AT3G44785 / 2745945 AraportID:AT3G44785 Length:75 Species:Arabidopsis thaliana


Alignment Length:52 Identity:36/52 - (69%)
Similarity:44/52 - (84%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLY 52
            |.|:||||:|||||:|||.||||||.||:||||||::.||:.|.|:||.|.|
plant     1 MVEHLASIYGTEKDRVNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTY 52

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2af38NP_477208.1 zf-CCCH 13..39 CDD:459885 19/25 (76%)
RRM_U2AF35 43..148 CDD:409954 6/10 (60%)
zf-CCCH 151..177 CDD:459885
AT3G44785NP_974385.1 zf-CCCH 13..36 CDD:459885 18/22 (82%)
Blue background indicates that the domain is not in the aligned region.

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