DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2af38 and Zrsr2

DIOPT Version :10

Sequence 1:NP_477208.1 Gene:U2af38 / 33201 FlyBaseID:FBgn0017457 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_033479.2 Gene:Zrsr2 / 22184 MGIID:103287 Length:541 Species:Mus musculus


Alignment Length:350 Identity:107/350 - (30%)
Similarity:146/350 - (41%) Gaps:117/350 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYV------------NPQNSAKSADG 64
            |||:.||.||.|.||||.||||||.||.||.|.|:|::.::.            :|.:|.:    
Mouse   170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLE---- 230

  Fly    65 SHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAA 129
                  .|:||:.:.:.:|:.||..|.: ..|::.:..|..||..||.||||:::::|.|.:.|.
Mouse   231 ------FSEEEIYQQFLDFYYDVLPEFK-SVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAF 288

  Fly   130 NDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHL--KPIS--RELRRYLY-- 188
            :..|.||:.||.:..|..|||.::.|.|..:|:.:|.|...|||:|:  .|.:  |:..|.||  
Mouse   289 SVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRDLYPS 353

  Fly   189 ---------------------------SRRRR--------------------------------- 193
                                       |||||                                 
Mouse   354 PDWTSSSFGKNSERRERASHYDEYYGRSRRRRRSPSPDFYKRNGESDRKSSSRHRVKKSHRYGMK 418

  Fly   194 ARSRSRSPGRRR-------------------GSRSRSRSPGR-RGGGRGDGVGGGNYLNNERDNM 238
            :|.|..||.|||                   .|||||||..| |...||.|        ..|...
Mouse   419 SRERRSSPSRRRKDHSPGPWSQSRRSHRSRSRSRSRSRSRSRTRSRSRGRG--------RSRSRS 475

  Fly   239 RGNDRGNDRDRRKGGGGGGGGGGGR 263
            |...||..|.|.:|.|.|.|.|.||
Mouse   476 RSRSRGRSRSRGRGSGRGRGRGRGR 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2af38NP_477208.1 zf-CCCH 13..39 CDD:459885 18/25 (72%)
RRM_U2AF35 43..148 CDD:409954 31/116 (27%)
zf-CCCH 151..177 CDD:459885 9/27 (33%)
Zrsr2NP_033479.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..138
zf-CCCH 171..195 CDD:459885 17/23 (74%)
RRM_U2AFBPL 203..307 CDD:409956 30/114 (26%)
ZnF_C3H1 310..335 CDD:214632 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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