Protein Alignment U2af38 and u2af1

DIOPT Version :10

• Sequence 1: NP_477208.1
• Gene: U2af38 / 33201
• FlyBaseID: FBgn0017457
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_803432.1
• Gene: u2af1 / 192328
• ZFINID: ZDB-GENE-020419-1
• Length: 249
• Species: Danio rerio
• Alignment Length: 263
• Identity: 187/263 - (71%)
• Similarity: 204/263 - (77%)
• Gaps: 30/263 - (11%)

  Fly     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGS 65
            |||||||||||||||||||||||||||||||||||:|||||||||:.|.|:|.||||:|:||||.
Zfish     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGL 65

  Fly    66 HLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAAN 130
            :.   |||.|||||||.|||:||.|.|:||||:||||||||||||||||||:|||.|.|||||..
Zfish    66 NA---VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 127

  Fly   131 DLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRRRAR 195
            :||||||.|:|:::|||||||||||||||||||||||.|||||||||||||||||.||.|||: |
Zfish   128 NLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRK-R 191

  Fly   196 SRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRGNDRDRRKGGGGGGGGG 260
            .||||..|.|.||||.|:.|..|...|   |||                       |||||||||
Zfish   192 HRSRSRSRERRSRSRGRNKGVGGAAAG---GGG-----------------------GGGGGGGGG 230

  Fly   261 GGR 263
            |||
Zfish   231 GGR 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
U2af38	NP_477208.1	zf-CCCH	13..39	CDD:459885	24/25 (96%)
		RRM_U2AF35	43..148	CDD:409954	73/104 (70%)
		zf-CCCH	151..177	CDD:459885	24/25 (96%)
u2af1	NP_803432.1	zf-CCCH	13..39	CDD:459885	24/25 (96%)
		RRM_U2AF35	43..145	CDD:409954	73/104 (70%)
		zf-CCCH	148..174	CDD:459885	24/25 (96%)