DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2af38 and U2AF1L5

DIOPT Version :9

Sequence 1:NP_001259814.1 Gene:U2af38 / 33201 FlyBaseID:FBgn0017457 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001307575.1 Gene:U2AF1L5 / 102724594 -ID:- Length:240 Species:Homo sapiens


Alignment Length:254 Identity:188/254 - (74%)
Similarity:203/254 - (79%) Gaps:17/254 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGS 65
            |||||||||||||||||||||||||||||||||||:|||||||||:.|.|:|.|||||::|||| 
Human     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG- 64

  Fly    66 HLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAAN 130
             |...|||.|||||||.|||:||.|.|:||||:||||||||||||||||||:|||.|.|||||..
Human    65 -LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 128

  Fly   131 DLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRRRA- 194
            |||||||.|:|:::|||||||||||||||||||||||.|||||||||||||||||.||.|||:. 
Human   129 DLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKH 193

  Fly   195 RSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRGNDRDRRKGG 253
            ||||||    |..|||||..||.|||.|.|.|||          |..||...|||.:.|
Human   194 RSRSRS----RERRSRSRDRGRGGGGGGGGGGGG----------RERDRRRSRDRERSG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2af38NP_001259814.1 zf-CCCH 13..39 CDD:279036 24/25 (96%)
RRM_U2AF35 43..148 CDD:240982 75/104 (72%)
zf-CCCH 151..177 CDD:279036 24/25 (96%)
U2AF1L5NP_001307575.1 zf-CCCH 13..39 CDD:395517 24/25 (96%)
RRM_U2AF35 43..146 CDD:409954 75/104 (72%)
zf-CCCH 149..175 CDD:395517 24/25 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..240 35/70 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147839
Domainoid 1 1.000 94 1.000 Domainoid score I7476
eggNOG 1 0.900 - - E1_KOG2202
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 377 1.000 Inparanoid score I2090
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56320
OrthoDB 1 1.010 - - D1340384at2759
OrthoFinder 1 1.000 - - FOG0002537
OrthoInspector 1 1.000 - - otm41715
orthoMCL 1 0.900 - - OOG6_101418
Panther 1 1.100 - - LDO PTHR12620
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4380
SonicParanoid 1 1.000 - - X1660
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1413.840

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