DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2af38 and LOC102724594

DIOPT Version :10

Sequence 1:NP_477208.1 Gene:U2af38 / 33201 FlyBaseID:FBgn0017457 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001307575.1 Gene:LOC102724594 / 102724594 -ID:- Length:240 Species:Homo sapiens


Alignment Length:254 Identity:188/254 - (74%)
Similarity:203/254 - (79%) Gaps:17/254 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGS 65
            |||||||||||||||||||||||||||||||||||:|||||||||:.|.|:|.|||||::|||| 
Human     1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG- 64

  Fly    66 HLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAAN 130
             |...|||.|||||||.|||:||.|.|:||||:||||||||||||||||||:|||.|.|||||..
Human    65 -LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 128

  Fly   131 DLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLYSRRRRA- 194
            |||||||.|:|:::|||||||||||||||||||||||.|||||||||||||||||.||.|||:. 
Human   129 DLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKH 193

  Fly   195 RSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRGNDRDRRKGG 253
            ||||||    |..|||||..||.|||.|.|.|||          |..||...|||.:.|
Human   194 RSRSRS----RERRSRSRDRGRGGGGGGGGGGGG----------RERDRRRSRDRERSG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2af38NP_477208.1 zf-CCCH 13..39 CDD:459885 24/25 (96%)
RRM_U2AF35 43..148 CDD:409954 75/104 (72%)
zf-CCCH 151..177 CDD:459885 24/25 (96%)
LOC102724594NP_001307575.1 zf-CCCH 13..39 CDD:459885 24/25 (96%)
RRM_U2AF35 43..146 CDD:409954 75/104 (72%)
zf-CCCH 149..175 CDD:459885 24/25 (96%)

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