DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amnionless and Amn

DIOPT Version :9

Sequence 1:NP_001259813.1 Gene:Amnionless / 33199 FlyBaseID:FBgn0025686 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001101531.1 Gene:Amn / 314459 RGDID:1308634 Length:459 Species:Rattus norvegicus


Alignment Length:524 Identity:118/524 - (22%)
Similarity:198/524 - (37%) Gaps:140/524 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLHWQWLIWALVGLHVALATKWYGGGMDFNDPTAWLDDHLPCAQDLVVFPEYYPALLPLPEDIS 65
            ||...:.|:|..:......|.|.:.....|:..:.|..:..|||.|.|.||......:.:.:..:
  Rat     1 MGALGRVLLWLQLCALTRAAYKLWVPNTSFDTASNWNQNRTPCAGDAVQFPADKMVSVLVRDSHA 65

  Fly    66 IDGLVFPREGAILLAEESTIT-FGSDKQPSCESDENKAYLKPPKSSKWFDPGTWTDKSKEFSTFT 129
            |..::.|..|..:||..:..: .|.|..|:|.......:..|.:.| |.||..|:..::|...|.
  Rat    66 ISDMLLPLNGEFVLASGAAFSAAGGDSDPACNPGAPLLFRNPDRFS-WLDPHLWSSGTQESGIFF 129

  Fly   130 PELERIPCDDEQVIIKGHGPLAFDL---ENVQYLRLGQLILAGSSISKTYLEQ------LISRDL 185
            .:.||:||..:.|:...:|.....|   .|..::|      :.|::.:|:...      |.||: 
  Rat   130 VDAERVPCTYDDVLFPRNGSFRVALGPGPNPVHVR------SVSAVGQTFTRDEDLAAFLASRE- 187

  Fly   186 GQFLFYNAEYVQVEYYRGELC----GCHKDFERLLEPVCHNVQE----QCETPHCLSPVRPLGSC 242
            |:..|:.:..::|   ..:.|    ||.......|..:|.::.:    :|....|..||||.|.|
  Rat   188 GRLRFHGSGALRV---GSQACTDATGCVCGNAETLPWICASLLQPLGGRCPEATCQDPVRPQGQC 249

  Fly   243 CLICGAILSTPTTHCTEGSRKELVAQISNLISQESLKDQIGLHVEFVGSQKFGNCLQAVVTDRHK 307
            |.:||||:|  .||......:...|::.:|..::.         ::.|.|.   .:..|:.|.| 
  Rat   250 CDLCGAIVS--LTHDPTFDLERYRARLLDLFLKQP---------QYQGLQV---AVSKVLRDAH- 299

  Fly   308 YSERSLEFLQQNEHNWNKTG------------------------TTLKVSGRPYNPNVSF----- 343
             :|..:..|:...    .||                        .||:.||:|...|.:.     
  Rat   300 -TEIQVVLLETRP----ATGAAGQLGHALLQDAVAQGSVLGIVSATLRQSGKPTAANSALDQNGS 359

  Fly   344 --------SSIVLILFCMALVGLVSVVILAHFMPENPYLNRIPQWIHDPRLWRWRHLGLRLRRNL 400
                    :::||    :||||  :|::|.|               ...|| |||          
  Rat   360 GAGLAGGVAAVVL----LALVG--TVLLLLH---------------RSGRL-RWR---------- 392

  Fly   401 LFNRFDNGGAEGGSSEGGASGVDRLGIMAYDPESGEVRERAFDNPMFEQGGALEEAAKESQEQDE 465
                      ..|.:|..::|:. ||.          |...||..:|:|..|..|.|..:|:.| 
  Rat   393 ----------RHGDAEPTSAGLP-LGF----------RNPIFDVMVFKQQQASVEFADSTQKVD- 435

  Fly   466 ILSV 469
            ||.:
  Rat   436 ILDI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmnionlessNP_001259813.1 Amnionless 21..448 CDD:291494 104/481 (22%)
AmnNP_001101531.1 Amnionless 21..452 CDD:291494 113/504 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354533
Domainoid 1 1.000 81 1.000 Domainoid score I8346
eggNOG 1 0.900 - - E1_28N9A
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D356731at33208
OrthoFinder 1 1.000 - - FOG0008021
OrthoInspector 1 1.000 - - oto98132
orthoMCL 1 0.900 - - OOG6_108642
Panther 1 1.100 - - LDO PTHR14995
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5974
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.710

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