DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and MFRP

DIOPT Version :10

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_113621.1 Gene:MFRP / 83552 HGNCID:18121 Length:579 Species:Homo sapiens


Alignment Length:103 Identity:27/103 - (26%)
Similarity:34/103 - (33%) Gaps:40/103 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 RVKNSRTPLQHF-LGMTEEDYDHAAV--AGSSTSALRGGEQPP-----------PPSAPSSP--- 336
            |.::||.  .|| |.....|.|..||  ||:|........|..           |||.||:.   
Human    24 RARSSRA--WHFVLSAARRDTDARAVALAGNSNWGYDSDGQHSDSDSDPEYSSLPPSIPSAVPVT 86

  Fly   337 ---------------CNN------GSEDRTPDGAEGEC 353
                           ||:      |.:.|..:..||||
Human    87 GESFCDCEGQNEATFCNSLHTAHRGKDCRCGEEDEGEC 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560
7tmF_SMO_homolog 245..568 CDD:320158 27/103 (26%)
TM helix 1 254..279 CDD:320158
TM helix 2 289..310 CDD:320158 7/21 (33%)
TM helix 3 340..366 CDD:320158 6/14 (43%)
TM helix 4 382..398 CDD:320158
TM helix 5 420..449 CDD:320158
TM helix 6 471..498 CDD:320158
TM helix 7 529..554 CDD:320158
MFRPNP_113621.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..143 8/25 (32%)
CUB 144..252 CDD:238001
LDLa 260..294 CDD:238060
CUB 301..411 CDD:238001
LDLa 421..454 CDD:238060
CRD_FZ 466..579 CDD:143549
Blue background indicates that the domain is not in the aligned region.

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