DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smo and FZD1

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_003496.1 Gene:FZD1 / 8321 HGNCID:4038 Length:647 Species:Homo sapiens


Alignment Length:650 Identity:152/650 - (23%)
Similarity:249/650 - (38%) Gaps:144/650 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IMMFLEVAILCLWVVADASASSAKFG------STTPASAQQSDVELEPINGTLNYRLYAKKGRDD 70
            ::::|..|.|.|.|.|.|:......|      ...|...|||.   :..||              
Human    57 LLLWLLEAPLLLGVRAQAAGQGPGQGPGPGQQPPPPPQQQQSG---QQYNG-------------- 104

  Fly    71 KPWFDGLDSRHIQCVRRARCYPTS--NATNTCFGSKLPYELSSLDLTDFHTEKE-LNDKLNDYYA 132
                    .|.|.......|.|.|  ..|:..:...:...|..      ||.:| ...:::.:|.
Human   105 --------ERGISVPDHGYCQPISIPLCTDIAYNQTIMPNLLG------HTNQEDAGLEVHQFYP 155

  Fly   133 LKHVPKCWAAIQPFLCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRILYNTTFF--PKFLRCN 195
            |..| :|.|.::.|||:::.|.|..:   :....|...:|....:.|..|.|...|  |..|:|.
Human   156 LVKV-QCSAELKFFLCSMYAPVCTVL---EQALPPCRSLCERARQGCEALMNKFGFQWPDTLKCE 216

  Fly   196 E-----------------------TLFPTKCTN--------------GARGMKFNGTGQCLSPLV 223
            :                       :|.|...|:              |..|....|...|...|.
Human   217 KFPVHGAGELCVGQNTSDKGTPTPSLLPEFWTSNPQHGGGGHRGGFPGGAGASERGKFSCPRALK 281

  Fly   224 PTDTSASYYPGIEGCGVRCKDP------LYTDDEHRQIHKLIGWAGSICLLSNLFVVSTFFIDWK 282
            .......::.|.:.||..|:..      .:..:|.|.....||....:|..|.||.|.|:.:|.:
Human   282 VPSYLNYHFLGEKDCGAPCEPTKVYGLMYFGPEELRFSRTWIGIWSVLCCASTLFTVLTYLVDMR 346

  Fly   283 NANKYPAVIVFYINLCFLIACVGWLLQFTSGSREDIVCR----KDGTLRHSEPTAGENLSCIVIF 343
            ..: ||...:.:::.|:....|.::..|....|  :||.    :||....::.|..|  .|.::|
Human   347 RFS-YPERPIIFLSGCYTAVAVAYIAGFLLEDR--VVCNDKFAEDGARTVAQGTKKE--GCTILF 406

  Fly   344 VLVYYFLTAGMVWFVFLTYAWHWRA---MGHVQDRIDKKGSYFHLVAWSLPLVLTITTMAFSEVD 405
            :::|:|..|..:|:|.|:..|...|   .||  :.|:....||||.||::|.:.|||.:|..:||
Human   407 MMLYFFSMASSIWWVILSLTWFLAAGMKWGH--EAIEANSQYFHLAAWAVPAIKTITILALGQVD 469

  Fly   406 GNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGYFITRGMVMLFG----LKHFANDIKSTSASN 466
            |:.:.|:||||..|.....|.:|.||...:.||..|:..|.|.||.    :||      ..:.:.
Human   470 GDVLSGVCFVGLNNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKH------DGTKTE 528

  Fly   467 KIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEW-----AQSFRQFIICKISSVFEEKSSC- 525
            |:..:::|:||.::|..|...:.|||:..|....|:|     |||.:.:.|           .| 
Human   529 KLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFRDQWERSWVAQSCKSYAI-----------PCP 582

  Fly   526 ----------RIENRPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKRYIRK----KCGKEVV 576
                      .....|...|..:..|.....||....|.|:..::.:|:::..:    |.|:..|
Human   583 HLQAGGGAPPHPPMSPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSKQGETTV 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 34/176 (19%)
Frizzled 246..568 CDD:279827 94/348 (27%)
FZD1NP_003496.1 CRD_FZ1 112..238 CDD:143574 27/135 (20%)
Frizzled 310..634 CDD:279827 94/347 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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