DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and SFRP5

DIOPT Version :10

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_003006.2 Gene:SFRP5 / 6425 HGNCID:10779 Length:317 Species:Homo sapiens


Alignment Length:168 Identity:38/168 - (22%)
Similarity:61/168 - (36%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PASAQQSDV---ELEPINGTLNYRLYAKKGRDDKPWFDGLDSRHIQCVRRARCYPTSNATNTCFG 102
            ||..::.|.   :.||::|    |.|:|..               ||:......|..:..    |
Human    26 PARCEEYDYYGWQAEPLHG----RSYSKPP---------------QCLDIPADLPLCHTV----G 67

  Fly   103 SK---LPYELSSLDLTDFHTEKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDMV 164
            .|   ||      :|.:..:..|:..:.:.:..|. ..:|.:..|.|||::|.|.|     .|..
Human    68 YKRMRLP------NLLEHESLAEVKQQASSWLPLL-AKRCHSDTQVFLCSLFAPVC-----LDRP 120

  Fly   165 YLPSYEMCRITMEPCRILYNTTFF--PKFLRCNETLFP 200
            ..|...:|......|..|.....|  |:.|.|::  ||
Human   121 IYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHK--FP 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/120 (23%)
7tmF_SMO_homolog 245..568 CDD:320158
TM helix 1 254..279 CDD:320158
TM helix 2 289..310 CDD:320158
TM helix 3 340..366 CDD:320158
TM helix 4 382..398 CDD:320158
TM helix 5 420..449 CDD:320158
TM helix 6 471..498 CDD:320158
TM helix 7 529..554 CDD:320158
SFRP5NP_003006.2 CRD_SFRP5 47..173 CDD:143553 31/143 (22%)
NTR_Sfrp1_like 178..303 CDD:239635
Blue background indicates that the domain is not in the aligned region.

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