DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and sfrp2

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_001070852.2 Gene:sfrp2 / 566878 ZFINID:ZDB-GENE-061013-293 Length:294 Species:Danio rerio


Alignment Length:177 Identity:37/177 - (20%)
Similarity:59/177 - (33%) Gaps:39/177 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RRARCYPTSNATNTCFGSKLPYELSSLDLTDFHTEKELNDKLNDYYALKHVP----KCWAAIQPF 146
            :::.|.|.......|.    ..|.:::.|.:....:.:|:.|..  |....|    :|....:.|
Zfish    34 KKSNCKPIPTNLLLCH----DIEYTNMRLPNLLGHETMNEVLQQ--ASSWTPLVQKQCHPDTKKF 92

  Fly   147 LCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRILYNTTFF--PKFLRCNETLFPTKCTNGARG 209
            ||::|.|.|  ::..|....|...:|......|..:.....|  |..|.|..  ||.        
Zfish    93 LCSLFAPVC--LDDLDEPIQPCRSLCESVKSGCAPVMAAFGFPWPDMLDCRR--FPL-------- 145

  Fly   210 MKFNGTGQCLSP-----LVPTDTSASYYPGIEGCGVRCKDPLYTDDE 251
                ....|:.|     |||.....   |.:  |.. ||:....|:|
Zfish   146 ----DNDLCIPPAGADALVPVTKEV---PRV--CDA-CKEKPENDNE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/140 (19%)
Frizzled 246..568 CDD:279827 2/6 (33%)
sfrp2NP_001070852.2 CRD_SFRP2 34..161 CDD:143555 29/148 (20%)
NTR_Sfrp1_like 167..294 CDD:239635 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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