DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and Sfrp5

DIOPT Version :10

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_061250.2 Gene:Sfrp5 / 54612 MGIID:1860298 Length:314 Species:Mus musculus


Alignment Length:190 Identity:43/190 - (22%)
Similarity:69/190 - (36%) Gaps:49/190 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LWVV--ADASASSAKFGST--TPASAQQSDV---ELEPINGTLNYRLYAKKGRDDKPWFDGLDSR 80
            :||.  |..:|.:...|:.  .|...|:.|.   :.||::|    |.|:|..             
Mouse     1 MWVAWSARTAALALLLGALHGAPTRGQEYDYYGWQAEPLHG----RSYSKPP------------- 48

  Fly    81 HIQCVRRARCYPTSNATNTCFGSK---LPYELSSLDLTDFHTEKELNDKLNDYYALKHVPKCWAA 142
              ||:......|..:..    |.|   ||      :|.:..:..|:..:.:.:..|. ..:|.:.
Mouse    49 --QCLDIPADLPLCHTV----GYKRMRLP------NLLEHESLAEVKQQASSWLPLL-AKRCHSD 100

  Fly   143 IQPFLCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRILYNTTFF--PKFLRCNETLFP 200
            .|.|||::|.|.|     .|....|...:|......|..|.....|  |:.|.|::  ||
Mouse   101 TQVFLCSLFAPVC-----LDRPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHK--FP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/120 (23%)
7tmF_SMO_homolog 245..568 CDD:320158
TM helix 1 254..279 CDD:320158
TM helix 2 289..310 CDD:320158
TM helix 3 340..366 CDD:320158
TM helix 4 382..398 CDD:320158
TM helix 5 420..449 CDD:320158
TM helix 6 471..498 CDD:320158
TM helix 7 529..554 CDD:320158
Sfrp5NP_061250.2 CRD_SFRP5 44..170 CDD:143553 31/143 (22%)
NTR_Sfrp1_like 175..300 CDD:239635
Blue background indicates that the domain is not in the aligned region.

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