DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and fzd10

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_001005669.1 Gene:fzd10 / 448162 XenbaseID:XB-GENE-480379 Length:585 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560
Frizzled 246..568 CDD:279827
fzd10NP_001005669.1 CRD_FZ10 35..161 CDD:143571
7tmF_FZD10 221..540 CDD:320165
TM helix 1 230..255 CDD:320165
TM helix 2 264..285 CDD:320165
TM helix 3 314..340 CDD:320165
TM helix 4 357..373 CDD:320165
TM helix 5 395..424 CDD:320165
TM helix 6 444..471 CDD:320165
TM helix 7 501..526 CDD:320165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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