DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and fz2

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster


Alignment Length:581 Identity:138/581 - (23%)
Similarity:242/581 - (41%) Gaps:138/581 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CFGSKLPYELSSL-DLTDFHTEKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDM 163
            |.|  :.|.::|. :..:..|:.|...:::.::.|..: ||...::.|||:::.|.|.    || 
  Fly    72 CRG--IGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEI-KCSPDLKFFLCSMYTPICL----ED- 128

  Fly   164 VYLPSYEMCRITMEPCR-----ILYNTTF-FPKFLRCNE-----------------TLFPTKCTN 205
             |.....:||...|..|     |:...:| :|:.:.|..                 |...:..::
  Fly   129 -YHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSS 192

  Fly   206 GARGMKFNGTG----------------------------------------------------QC 218
            |..|...:|:|                                                    .|
  Fly   193 GGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASGKECSCSC 257

  Fly   219 LSPLV----------PTDTSASYYP-------------GIEGCGVRCKDPLYTDDEHRQIHKLIG 260
            .|||:          .:.....::|             |:..||:.||.|.:::||.......|.
  Fly   258 RSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFSNDEKDFAGLWIA 322

  Fly   261 -WAGSICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACVGWL----LQFTSGSREDIVC 320
             |:| :|..|.|..::||.||.:.. |||...:.:::.|:.:..||:|    ||     .|:|.|
  Fly   323 LWSG-LCFCSTLMTLTTFIIDTERF-KYPERPIVFLSACYFMVAVGYLSRNFLQ-----NEEIAC 380

  Fly   321 RKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA-MGHVQDRIDKKGSYFH 384
              ||.|.....|...  ||.::|:|.|:|..|..:|:|.|::.|...| :....:.|.|...|||
  Fly   381 --DGLLLRESSTGPH--SCTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFH 441

  Fly   385 LVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGYFITRGMVML 449
            |.||.:|.|.::..:..|.|||:.|:|||:||.:|.......:|.||...::||..|:..|.|.|
  Fly   442 LAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSL 506

  Fly   450 FGLKHFANDIKSTSA---SNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSFRQFI 511
            |.::..........|   ::|:..:::|:|:.::|..|...:.|.|::.|..:.::|.::    :
  Fly   507 FRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKA----L 567

  Fly   512 ICKISSVFEEKSSCRIENRPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKRYIRKKCG 572
            .|..:.|   |...:   :|...||.|......:.||....|.|:..::|:|:|:.|:..|
  Fly   568 ACPCAQV---KGPGK---KPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRRLLG 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 31/196 (16%)
Frizzled 246..568 CDD:279827 95/330 (29%)
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 25/118 (21%)
Frizzled 308..618 CDD:279827 95/330 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438648
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11309
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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