DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and Sfrp5

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_001101061.1 Gene:Sfrp5 / 309377 RGDID:1310369 Length:314 Species:Rattus norvegicus


Alignment Length:168 Identity:39/168 - (23%)
Similarity:61/168 - (36%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PASAQQSDV---ELEPINGTLNYRLYAKKGRDDKPWFDGLDSRHIQCVRRARCYPTSNATNTCFG 102
            ||..|:.|.   :.||::|    |.|:|..               ||:......|..:..    |
  Rat    23 PARGQEYDYYGWQTEPLHG----RSYSKPP---------------QCLDIPADLPLCHTV----G 64

  Fly   103 SK---LPYELSSLDLTDFHTEKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDMV 164
            .|   ||      :|.:..:..|:..:.:.:..|. ..:|.:..|.|||::|.|.|     .|..
  Rat    65 YKRMRLP------NLLEHESLAEVKQQASSWLPLL-AKRCHSDTQVFLCSLFAPVC-----LDRP 117

  Fly   165 YLPSYEMCRITMEPCRILYNTTFF--PKFLRCNETLFP 200
            ..|...:|......|..|.....|  |:.|.|::  ||
  Rat   118 IYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHK--FP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/120 (23%)
Frizzled 246..568 CDD:279827
Sfrp5NP_001101061.1 CRD_SFRP5 44..170 CDD:143553 31/143 (22%)
NTR_Sfrp1_like 175..300 CDD:239635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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