DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smo and fzd7b

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_739569.1 Gene:fzd7b / 30412 ZFINID:ZDB-GENE-990415-229 Length:557 Species:Danio rerio


Alignment Length:521 Identity:135/521 - (25%)
Similarity:227/521 - (43%) Gaps:111/521 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 HTEKE-LNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRI 181
            ||.:| ...:::.:|.|..| :|...::.|||:::.|.|..:   :....|...:|....:.|..
Zfish    69 HTNQEDAGLEVHQFYPLVKV-QCSQDLKFFLCSMYAPVCTVL---EQAIPPCRTLCERARQGCEA 129

  Fly   182 LYNTTFF--PKFLRCNETLFPTKCTNGARGMKFNGTGQ-CL-----SPLVPTDTSASYYP----- 233
            |.|...|  |:.|||..  ||.           :|.|: |:     .|.|||.....|.|     
Zfish   130 LMNKFGFQWPERLRCEN--FPV-----------HGAGEICVGQNKSDPDVPTTNPTPYIPEPFSP 181

  Fly   234 ----------------------------GIEGCGVRC--KDP---LYTDDEHRQIHKLIGWAG-- 263
                                        |.:.||..|  |.|   :|..:|..:..:|  |.|  
Zfish   182 RIHTPRQNQAFTCPLQLTVPSYLNYHFLGAKNCGAPCEHKQPYGLMYFKEEEVRFGRL--WVGIW 244

  Fly   264 -SICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACV----GWLLQFTSGSREDIVC--- 320
             .:|.:|.||.|.|:.:|.:..: ||...:.:::.|:.:..|    |:||:      :.:||   
Zfish   245 SILCCVSTLFTVLTYLVDMRRFH-YPERPIIFLSGCYFMVAVAYAAGFLLE------DKVVCIDK 302

  Fly   321 -RKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA---MGHVQDRIDKKGS 381
             |.|.....::.|..|  .|.::|:::|:|..|..:|:|.|:..|...|   .||  :.|:....
Zfish   303 FRDDAFKTVAQGTKKE--GCTILFMVLYFFGMASSIWWVILSLTWFLSAGMKWGH--EAIEANSQ 363

  Fly   382 YFHLVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGYFITRGM 446
            ||||.||::|.|.|||.:|..:|||:.:.|:|:||..|.....|.:|.||...:.||..|:..|.
Zfish   364 YFHLAAWAVPAVKTITILALGQVDGDLLTGVCYVGIYNVDALRGFVLAPLFVYLFIGTSFLLAGF 428

  Fly   447 VMLFG----LKHFANDIKSTSASNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSF 507
            |.||.    :||      ..:.:.|:..:::|:||.::|..|...:.|||:..|....::|.:::
Zfish   429 VSLFRIRTIMKH------DGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTW 487

  Fly   508 RQFIICKISSVFEEKSSCRIEN----RPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKRYIR 568
             ....||..:|     .|...|    .|...|..:..|.....||....|.|:..::::|:|:.:
Zfish   488 -HMQTCKRFAV-----PCPNNNFAPMTPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQSWRRFYK 546

  Fly   569 K 569
            :
Zfish   547 R 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 27/111 (24%)
Frizzled 246..568 CDD:279827 96/343 (28%)
fzd7bNP_739569.1 CRD_FZ1_like 43..161 CDD:143567 27/108 (25%)
Frizzled 228..545 CDD:279827 96/341 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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