DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and fzd5

DIOPT Version :10

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_571209.2 Gene:fzd5 / 30364 ZFINID:ZDB-GENE-990415-218 Length:592 Species:Danio rerio


Alignment Length:507 Identity:131/507 - (25%)
Similarity:220/507 - (43%) Gaps:88/507 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 EKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDMVYLPSYEM----CRITME--- 177
            :.|:..:::.::.|..: .|...:..|||:::.|.|          |..|:.    ||...|   
Zfish    72 QDEVGLEVHQFWPLVRI-HCSPDLLFFLCSMYTPIC----------LQDYKKPLPPCRSVCERAK 125

  Fly   178 ----PCRILYNTTFFPKFLRCNE--------------------TL---FPTKCTNG--------- 206
                |..|.|... :|:.:.|.:                    ||   ||.....|         
Zfish   126 RGCSPLMIQYGFE-WPERMSCEQLPMLGDTDRLCMDRNSSETTTLSPPFPKPTPKGTPRHRATAK 189

  Fly   207 -ARGMKFNGTGQCLSPLVPTDTSASYYP--------GIEGCGVRCKDPLYTDDEHRQIHKLIGWA 262
             |...|.:....|..||||....|  :|        .:..|.:.|..|.::.||.......||..
Zfish   190 SAP
PQKCDRECHCRGPLVPIKKEA--HPLHNRVNTGSLPNCALPCHQPYFSQDERTFTTFWIGLW 252

  Fly   263 GSICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACVGWLLQFTSGSREDIVCRKDGTLR 327
            ..:|.:|....|:||.||.:.. |||...:.::..|:|...:|::::..:| .|.:.|...|..:
Zfish   253 SVLCFVSTFTTVATFLIDMERF-KYPERPIIFLAACYLFVSLGYIVRLLAG-HERVACEGTGDQQ 315

  Fly   328 H-SEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA-MGHVQDRIDKKGSYFHLVAWSL 390
            | ...|.|..| |.::|:|:|:|..|..:|:|.|::.|...| |....:.|.....||||.||.:
Zfish   316 HILYDTTGPAL-CTLVFLLIYFFGMASSIWWVVLSFTWFLAAGMKWGNEAIAGYSQYFHLAAWLV 379

  Fly   391 PLVLTITTMAFSEVDGNSIVGICFVGYINHSMRA--GLLLGPLCGVILIGGYFITRGMVMLFGLK 453
            |.|.:|..:|.|.|||:.:.|||:||  |.|:..  |.:|.||...:..|..|:..|.|.||.::
Zfish   380 PSVKSIAVLALSSVDGDPVAGICYVG--NQSLEGLRGFVLAPLVVYLFTGSLFLLAGFVSLFRIR 442

  Fly   454 HFANDIKSTSASNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSFRQFIICKISSV 518
            ....  :..:.::|:..:::|:|:..:|..|...:.:||.|.|..:...|.::    :.|...| 
Zfish   443 SVIK--QGGTKTDKLEKLMIRIGLFTVLYTVPATIVVACLVYEQHYRPSWERA----LACSCPS- 500

  Fly   519 FEEKSSCRIENRPSVGVLQL-HLLCLFSSGIVMSTWCWTPSSIETWKRYIRK 569
              |:.  |:...|...|..| :.:||. .||....|.|:..::|:|:|:|.:
Zfish   501 --ERQ--RLGMGPDYAVFMLKYFMCLV-VGITSGVWIWSGKTLESWRRFIAR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 26/144 (18%)
7tmF_SMO_homolog 245..568 CDD:320158 96/327 (29%)
TM helix 1 254..279 CDD:320158 7/24 (29%)
TM helix 2 289..310 CDD:320158 3/20 (15%)
TM helix 3 340..366 CDD:320158 9/25 (36%)
TM helix 4 382..398 CDD:320158 9/15 (60%)
TM helix 5 420..449 CDD:320158 9/30 (30%)
TM helix 6 471..498 CDD:320158 8/26 (31%)
TM helix 7 529..554 CDD:320158 7/25 (28%)
fzd5NP_571209.2 CRD_FZ5_like 44..163 CDD:143565 18/102 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..192 5/29 (17%)
7tmF_FZD5 235..546 CDD:320377 96/327 (29%)
TM helix 1 244..269 CDD:320377 7/24 (29%)
TM helix 2 278..299 CDD:320377 3/20 (15%)
TM helix 3 328..354 CDD:320377 9/25 (36%)
TM helix 4 371..387 CDD:320377 9/15 (60%)
TM helix 5 409..438 CDD:320377 8/28 (29%)
TM helix 6 458..485 CDD:320377 8/26 (31%)
TM helix 7 507..532 CDD:320377 7/25 (28%)

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