DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and Sfrp4

DIOPT Version :10

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_057896.1 Gene:Sfrp4 / 20379 MGIID:892010 Length:351 Species:Mus musculus


Alignment Length:147 Identity:36/147 - (24%)
Similarity:59/147 - (40%) Gaps:25/147 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VRRARCYPTSNATNTCFGSKLPYELSSLDLTDFH-TEKELNDKLNDYYALKHVPKCWAAIQPFLC 148
            ||.|.|    .|........:|:.::.:.....| |::.....:..|..|..| .|.:.::.|||
Mouse    19 VRGAPC----EAVRIPMCRHMPWNITRMPNHLHHSTQENAILAIEQYEELVDV-NCSSVLRFFLC 78

  Fly   149 AVFKPKCEKINGEDMVYLPSYEMC---RITMEPCRILYNTTFFPKFLRCNETLFPTKCTNGARGM 210
            |::.|.|......|.: .|...:|   |...||...:||.: :|:.|.|:|             :
Mouse    79 AMYAPICTLEFLHDPI-KPCKSVCQRARDDCEPLMKMYNHS-WPESLACDE-------------L 128

  Fly   211 KFNGTGQCLSP-LVPTD 226
            .....|.|:|| .:.||
Mouse   129 PVYDRGVCISPEAIVTD 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 31/138 (22%)
7tmF_SMO_homolog 245..568 CDD:320158
TM helix 1 254..279 CDD:320158
TM helix 2 289..310 CDD:320158
TM helix 3 340..366 CDD:320158
TM helix 4 382..398 CDD:320158
TM helix 5 420..449 CDD:320158
TM helix 6 471..498 CDD:320158
TM helix 7 529..554 CDD:320158
Sfrp4NP_057896.1 CRD_FZ 20..146 CDD:470581 35/146 (24%)
NTR_like 188..296 CDD:470599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..351
Blue background indicates that the domain is not in the aligned region.

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