DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and Frzb

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_035486.1 Gene:Frzb / 20378 MGIID:892032 Length:323 Species:Mus musculus


Alignment Length:110 Identity:28/110 - (25%)
Similarity:42/110 - (38%) Gaps:27/110 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 FLCAVFKPKCEKINGEDMVYLPSYEMC---RITMEPCRILYNTTFFPKFLRCNETLFPTKCTNGA 207
            ||||::.|.| .|:.:.....|...:|   |...||..|.|..: :|:.|.|:|           
Mouse    87 FLCAMYAPIC-TIDFQHEPIKPCKSVCERARQGCEPILIKYRHS-WPESLACDE----------- 138

  Fly   208 RGMKFNGTGQCLSPLV---------PTDTSASYYPGIEGCGVRCK 243
              :.....|.|:||..         |.|:|..:..|......:||
Mouse   139 --LPVYDRGVCISPEAIVTADGADFPMDSSTGHCRGASSERCKCK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 20/77 (26%)
Frizzled 246..568 CDD:279827
FrzbNP_035486.1 CRD_SFRP3 32..157 CDD:143550 22/84 (26%)
NTR_Sfrp3_like 188..297 CDD:239636
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..323
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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