DRSC/TRiP Functional Genomics Resources

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Protein Alignment smo and Fzd9

DIOPT Version :9

Sequence 1:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster
Sequence 2:NP_034376.1 Gene:Fzd9 / 14371 MGIID:1313278 Length:592 Species:Mus musculus


Alignment Length:579 Identity:134/579 - (23%)
Similarity:240/579 - (41%) Gaps:98/579 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CFGSKLP------YELSSLDLTDFHTEK-ELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKC-E 156
            |...::|      |.|:.:.....||.: |...:|.::..|... .|.:.::.|||:::.|.| :
Mouse    40 CQAMEIPMCRGIGYNLTRMPNLLGHTSQGEAAAQLAEFSPLVQY-GCHSHLRFFLCSLYAPMCTD 103

  Fly   157 KINGEDMVYLPSYEMCRITMEPCRILYNTTFFPKFLRC------------------NETLFPTKC 203
            :::.......|..|..|:...|....:|.. :|..|.|                  |.|..||:.
Mouse   104 QVSTPIPACRPMCEQARLRCAPIMEQFNFG-WPDSLDCARLPTRNDPHALCMEAPENATAGPTEP 167

  Fly   204 TNG-----------------ARGMKFNGTGQCLSPLVPTDTSASYYPGIEGCGVRCKDPLYTDDE 251
            ..|                 |.|....||  |.:|     ....|......|..||...:.....
Mouse   168 HKGLGM
LPVAPRPARPPGDSAPGPGSGGT--CDNP-----EKFQYVEKSRSCAPRCGPGVEVFWS 225

  Fly   252 HRQIHKLIGWA---GSICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACVGWLLQFTSG 313
            .|.....:.|.   .::|..|..|.|.||.:: .:..:||...:.::::|:.:..:.:|::..:|
Mouse   226 RRDKDFALVWMAVWSALCFFSTAFTVFTFLLE-PHRFQYPERPIIFLSMCYNVYSLAFLIRAVAG 289

  Fly   314 SREDIVCRKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA---MGHVQDR 375
            : :.:.|.::....:......||..|.::|:|:|||..|..:|:|.||..|...|   .||  :.
Mouse   290 A-QSVACDQEAGALYVIQEGLENTGCTLVFLLLYYFGMASSLWWVVLTLTWFLAAGKKWGH--EA 351

  Fly   376 IDKKGSYFHLVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGY 440
            |:..|||||:.||.||.:.||..:...:|.|:.:.|:|:|..::.:...|.:|.||...:::|..
Mouse   352 IEAHGSYFHMAAWGLPALKTIVVLTLRKVAGDELTGLCYVASMDPAALTGFVLVPLSCYLVLGTS 416

  Fly   441 FITRGMVMLFGLKHFANDIKSTSASN--KIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEW 503
            |:..|.|.||.::    .|..|..:|  |:..:::::||.::|..|.....|.|:|.|..:.|.|
Mouse   417 FLLTGFVALFHIR----KIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIVCYVYERLNMDFW 477

  Fly   504 -AQSFRQFIICKISSVFEEKSSCRIE--NRPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKR 565
             .::..|  .|..::|...:..|.:.  :.|:|.|..|.:......||....|.|:..:.:||:.
Mouse   478 RLRATEQ--PCTAATVPGGRRDCSLPGGSVPTVAVFMLKIFMSLVVGITSGVWVWSSKTFQTWQS 540

  Fly   566 --YIRKKCGKEVVEEVKMPKHKVIAQTWAKRKDFEDKGR--------LSITLYNTHTDP 614
              |.:...|:...:..:.|               ...||        .::.|:.|.|||
Mouse   541 LCYRKMAAGRARAKACRTP---------------GGYGRGTHCHYKAPTVVLHMTKTDP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 33/163 (20%)
Frizzled 246..568 CDD:279827 87/334 (26%)
Fzd9NP_034376.1 CRD_FZ9 36..162 CDD:143572 24/123 (20%)
Required for Wnt-activated receptor activity. /evidence=ECO:0000250|UniProtKB:Q8K4C8 59..173 24/115 (21%)
7tmF_FZD9 222..543 CDD:320164 86/330 (26%)
TM helix 1 231..256 CDD:320164 7/24 (29%)
TM helix 2 265..286 CDD:320164 2/20 (10%)
TM helix 3 315..341 CDD:320164 11/25 (44%)
TM helix 4 358..374 CDD:320164 9/15 (60%)
TM helix 5 396..426 CDD:320164 8/29 (28%)
TM helix 6 445..472 CDD:320164 8/26 (31%)
TM helix 7 504..529 CDD:320164 6/24 (25%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 533..538 0/4 (0%)
Required for CTNNB1 accumulation and TCF transcription factor activity. /evidence=ECO:0000250|UniProtKB:Q8K4C8 555..592 8/45 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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