DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17075 and GABPI

DIOPT Version :10

Sequence 1:NP_608508.1 Gene:CG17075 / 33191 FlyBaseID:FBgn0031239 Length:968 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:220 Identity:58/220 - (26%)
Similarity:93/220 - (42%) Gaps:56/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 WLVLLLFGVASYWVLIPAFHARIQGPL--------YGLI----TGLYLVHIASHLTALL------ 164
            |||..:|    |.::|..|    |.||        |.|:    ..||.::.|..|:.|.      
  Fly   153 WLVFSVF----YMIIIFEF----QVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQY 209

  Fly   165 -TDPADK--------------------ELRRV-HRNDRIVPEFDRSKHSHVIENGRCHLCNI--R 205
             |.|.|:                    ::..| ..:|..|.:.|.::.|.:: :|:.::|.|  :
  Fly   210 GTTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLM-HGQPNICEICRK 273

  Fly   206 TSSNRTKHCSVCNKCVGKFDHHCKWLNHCIGSRNYVAFLMCVVSAVVATLVIVAAVVAQIV--FY 268
            .:..|..||.||..||.:.|||..|||.|||.||||.:::.:..:.:|.|:.....:..|.  |.
  Fly   274 VTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFM 338

  Fly   269 YIQPDWLSF-YWCPTESSHTIESGD 292
            .::|  |.: ...|.:.|...|..|
  Fly   339 VVRP--LGYPVLLPDDCSEVFEGFD 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17075NP_608508.1 DHHC 199..>282 CDD:396215 28/87 (32%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 33/102 (32%)

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