DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and CHR1

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_201476.1 Gene:CHR1 / 836808 AraportID:AT5G66750 Length:764 Species:Arabidopsis thaliana


Alignment Length:876 Identity:283/876 - (32%)
Similarity:414/876 - (47%) Gaps:198/876 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1751 GKSDKESKPEEQSETVKTEENSK-----AIEED------KSSTVLTADHAKEPETVLEKMEVDEK 1804
            ||::|::..:..:..:..|||.:     .:||:      ..|::::...|:|.|.:|:..|.:||
plant    19 GKTEKDASGDSPTSVLNEEENCEEKSVTVVEEEILLAKNGDSSLISEAMAQEEEQLLKLREDEEK 83

  Fly  1805 ANDDQSAV------SKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEK 1863
            ||:..|||      ::....||..|......|...|| .|.:.|.|.       |...:|...||
plant    84 ANNAGSAVAPNLNETQFTKLDELLTQTQLYSEFLLEK-MEDITINGI-------ESESQKAEPEK 140

  Fly  1864 TEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFE 1928
            |....:.|...          :|.|              .|..|.|||.|.|.::          
plant   141 TGRGRKRKAAS----------QYNN--------------TKAKRAVAAMISRSKE---------- 171

  Fly  1929 NIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLR 1993
              :.|..|.|.||.:.|:                                        |::.   
plant   172 --DGETINSDLTEEETVI----------------------------------------KLQN--- 191

  Fly  1994 FNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGL 2058
                                    |..|:..|| .|:.|||:|:.||...|.|..|.||||:|||
plant   192 ------------------------ELCPLLTGG-QLKSYQLKGVKWLISLWQNGLNGILADQMGL 231

  Fly  2059 GKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEY 2122
            |||||::.|:..:...|:.||:||||||||:.||..|...:| .:|.::|||....:..:: .::
plant   232 GKTIQTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELR-RKH 295

  Fly  2123 YYKTESGKVLKEPIKFNVLITTFEMIVTDYMD-LKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLN 2186
            ..||...       ||.::||::|:.:.|... |:.:.|:..||||.|||||..||||..|:.|.
plant   296 MPKTVGP-------KFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLK 353

  Fly  2187 LEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFG--------SLRTEEE------VN 2237
            :::::||:|||||||:|||:|||||:.|..|:|.:||.|.|.        :.:.|||      |:
plant   354 MDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVS 418

  Fly  2238 KLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANI--- 2299
            ||..:|:|.:|||:|.|||.||..|:|.|:...:|:.|||:.        ..|...|..|::   
plant   419 KLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQ--------EHLVNNTLEAHLGEN 475

  Fly  2300 --------PNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLID 2356
                    ..|.|.:::|||.|.||.||.|   ||...:.....|:       ::...||..|::
plant   476 AIRGQGWKGKLNNLVIQLRKNCNHPDLLQG---QIDGSYLYPPVEE-------IVGQCGKFRLLE 530

  Fly  2357 KLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFV 2421
            :||.:|.||.|:||||||..:.|||::.|...:.:...||||.::.:.|:..|..:|...|...:
plant   531 RLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSI 595

  Fly  2422 FLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFD 2486
            |||.|:|||||||||||||.|:||||||||.||||..|||||||.|.|.:|||....:.|..:..
plant   596 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLK 660

  Fly  2487 KASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDI---- 2547
            :|..||.|:..|:........:..::..|.:::|..|||        :|:.|.||..:.||    
plant   661 RAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLK--------EDETAEDKLIQTDISDAD 717

  Fly  2548 -DSILKRRTQVITMESEKGSTFSKASFAASG 2577
             |.:|.|....||   ..|.|.:..:|...|
plant   718 LDRLLDRSDLTIT---APGETQAAEAFPVKG 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 45/188 (24%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 15/66 (23%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 5/57 (9%)
PLN03142 2029..>2606 CDD:215601 227/581 (39%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
CHR1NP_201476.1 PLN03142 12..>739 CDD:215601 281/868 (32%)
Blue background indicates that the domain is not in the aligned region.

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