DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and CHR24

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_201200.2 Gene:CHR24 / 836516 AraportID:AT5G63950 Length:1090 Species:Arabidopsis thaliana


Alignment Length:1241 Identity:300/1241 - (24%)
Similarity:497/1241 - (40%) Gaps:368/1241 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1641 DEDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDL 1705
            ||::....:.||   |:|.|....|||              |||             :|....||
plant    41 DEETKKSMIKLA---GRRRLCKALPKE--------------DEA-------------DGYDDPDL 75

  Fly  1706 TD-----SEETKLESSAM--EVDSKEESEPDDSKKSDEDN--------------KDKDKME---- 1745
            .|     ..||.|:|:.:  :..|.:||:..:::.:.|.|              |.|::|:    
plant    76 VDFYSPVKGETSLDSAGIGNKFTSWDESKEANTELAGEPNFSIITDFCSPSPQLKQKEEMQGDGG 140

  Fly  1746 -------VDD---EVGKSDKESKPEEQSET-----VKTEENSKAIEEDKSSTVLTADHAKEPETV 1795
                   :||   ::|....:.|.:.||..     ||::.:....|:.|||..|.:|.:|     
plant   141 RNEIMGILDDLTSKLGTMSIQKKKDSQSNDFDACGVKSQVDKFDFEDAKSSFSLLSDLSK----- 200

  Fly  1796 LEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKEN 1860
                                          |:|:..||               ...|..|:|.:.
plant   201 ------------------------------SSPDVVTT---------------YNAGVNSIKDKQ 220

  Fly  1861 DEKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLN 1925
            .:...|..|.:..             :.||.   ||  ||.:....::.:...|.|.        
plant   221 GKSGFAIREEQTS-------------KEFSR---EW--EERISNVGKQNSYSGRHFD-------- 259

  Fly  1926 IFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLV--KWKSLPYEDCT--WELEEDVDND 1986
              :|.||   |:....:||........|: |.:||:|..|  |.:::...:..  .:|:||.|:|
plant   260 --DNSED---NRQGYNLDRGKSQCKEVDQ-SMKTTRHIEVSEKIRTVGRSNAAKLRDLDEDDDDD 318

  Fly  1987 -------KIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGN-----------SLRPYQ 2033
                   |....::.|| |.|| :.:|:..:.|...:.|.:....|.|           .|.|:|
plant   319 DCLILSGKKAAEMKINK-PARS-YNAKRHGYDERSLEDEGSITLTGLNLSYTLPGKIATMLYPHQ 381

  Fly  2034 LEGLNWLKFSWYNTH----NCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQR 2094
            .||||||    ::.|    ..||.|:||||||:|..:|:..::...:....||:||.:.:|:|.:
plant   382 REGLNWL----WSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAPKTLLPHWMK 442

  Fly  2095 EFE--GWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMI--------- 2148
            |..  |.:.| ...|:|:.|.   .::|:.::..: ||        .:|:||::::         
plant   443 ELATVGLSQM-TREYYGTSTK---AREYDLHHILQ-GK--------GILLTTYDIVRNNTKALQG 494

  Fly  2149 ---VTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLN 2210
               .||..|.....|...::||.|.:||.|.:..:.|.::...||:::||||:|||:.||::|.|
plant   495 DDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFN 559

  Fly  2211 FLEPSQFSSQEEFMSEFGS--LR------TEEE-------VNKLQALLKPMMLRRLKDDV----- 2255
            |..|.....:..|...:..  ||      |:.|       ...|:..::|..|||||.:|     
plant   560 FSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDG 624

  Fly  2256 -EKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLL 2319
             ...|:.|:|.::.:.||..|::.|...|....      ..||...:.:..:..|:|.|.||.||
plant   625 ATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEI------VLSAFDGSPLAALTILKKICDHPLLL 683

  Fly  2320 N--------------------GAEEQIQY---------DFKSQHGEDPESYYKNLILSAGKMVLI 2355
            .                    |..|::..         ||::::  |..|...:.|:|     |:
plant   684 TKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKN--DSISCKLSFIMS-----LL 741

  Fly  2356 DKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRF 2420
            :.|:|:    |||||||||..:.|::::|.|....|.|.||||..:...|.:.::.:.: |....
plant   742 ENLIPE----GHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQE-GHVAP 801

  Fly  2421 VFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMF 2485
            :|||.::.||||:.||.||.||:.|..|||..|.|:..|.:||||.|.|.:|||:...|.|.:::
plant   802 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIY 866

  Fly  2486 DKASMKLGLDKAVLQSMNTQGSKDGNNKQL---SKKEIEDL--LKKGA--------------YGA 2531
            .|...|.||.|...:          :.:|:   |::::.:|  |.||.              |..
plant   867 RKQVYKGGLFKTATE----------HKEQIRYFSQQDLRELFSLPKGGFDVSPTQQQLYEEHYNQ 921

  Fly  2532 VMDDDNAGD--KFCEE------DIDSILKRRT---QVITMESEK------GSTFSKASFAASGNR 2579
            :..|:....  ||.|.      ...|:|..:|   |.|..:.|:      .....:||.:.|   
plant   922 IKLDEKLESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEQIRRETALLLGRASASIS--- 983

  Fly  2580 SDITIDDPDFWTK-----WAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSEES 2639
            .|..|:..|:..|     ..|:::|.|       .:|..|||...:.::.|.    .|.|.::.:
plant   984 QDTVINGADYAFKPKDVNLDKRINISP-------VDDKELSESVIKARLNRL----TMLLQNKGT 1037

  Fly  2640 SNENSDEEGGIGLRSR----RRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECF 2700
            .:...|  ||..::.:    .|:.|..:|.|:....:.|..|.|...                  
plant  1038 VSRLPD--GGAKIQKQIAELTRELKDMKAAERINMPQVIDLEEDISR------------------ 1082

  Fly  2701 KVEKGL 2706
            |::|||
plant  1083 KMQKGL 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 61/321 (19%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 13/66 (20%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 15/68 (22%)
PLN03142 2029..>2606 CDD:215601 189/685 (28%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
CHR24NP_201200.2 PLN03142 323..>872 CDD:215601 169/585 (29%)
DEXHc_ERCC6L 377..614 CDD:350759 73/253 (29%)
Blue background indicates that the domain is not in the aligned region.

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