DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and RAD5

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_197667.1 Gene:RAD5 / 832338 AraportID:AT5G22750 Length:1029 Species:Arabidopsis thaliana


Alignment Length:1124 Identity:236/1124 - (20%)
Similarity:393/1124 - (34%) Gaps:386/1124 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1619 ISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRE------LILDKPKEKAPEPKQDEE 1677
            :.|..::..:|:..:.|..:..|.|     ::.|:.|...:      :|.|.|....|       
plant     1 MGTKVSDDLVSTVRSVVGSDYSDMD-----IIRALHMANHDPTAAINIIFDTPSFAKP------- 53

  Fly  1678 KSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKD 1742
                 :..|..|.|....|......|..|..     :|.::..:.:.|.|.:......|::...:
plant    54 -----DVATPTPSGSNGGKRVDSGLKGCTFG-----DSGSVGANHRVEEENESVNGGGEESVSGN 108

  Fly  1743 KMEVDDEVGKSD-------KESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKME 1800
            :...   ||.|:       |..|.:...|.|.|..:||.:               :|||...|..
plant   109 EWWF---VGCSELAGLSTCKGRKLKSGDELVFTFPHSKGL---------------KPETTPGKRG 155

  Fly  1801 VDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKE----------GEES 1855
            ...    .:.|:..|......||.||                 ||..|:..          .::.
plant   156 FGR----GRPALRGASDIVRFSTKDS-----------------GEIGRIPNEWARCLLPLVRDKK 199

  Fly  1856 VKKENDEKTEADMENKPEPVFIDVEEY-----FVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRR 1915
            ::.|...|:..:..:..:.:.:.|..|     |.|:...|:.......||.:.            
plant   200 IRIEGSCKSAPEALSIMDTILLSVSVYINSSMFQKHSATSFKTASNTAEESMF------------ 252

  Fly  1916 FQQKQSQQLNIFENIEDEPFN------QDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYED 1974
                 ....|:|..:...||.      :||....|.|...   |.::..|:...|.|.|:     
plant   253 -----HPLPNLFRLLGLIPFKKAEFTPEDFYSKKRPLSSK---DGSAIPTSLLQLNKVKN----- 304

  Fly  1975 CTWELEEDVDNDKIEQYL------RFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQ 2033
                :.:|.:.|:.||.:      ....:...|..|..:.||..|.:             |||||
plant   305 ----MNQDANGDENEQCISDGDLDNIVGVGDSSGLKEMETPHTLLCE-------------LRPYQ 352

  Fly  2034 LEGLNWLKFSWYNTHNC------------------------------------------------ 2050
            .:.|:|:  :.....||                                                
plant   353 KQALHWM--TQLEKGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGG 415

  Fly  2051 ILADEMGLGKTIQ--SLTFVHS-----------VYE----------------------YGI---- 2076
            ||||.||||||:.  ||...||           .||                      .|.    
plant   416 ILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL 480

  Fly  2077 --------RGPFLVIAPLSTIPNWQREFEGWT---DMNVVVYHGSVTSKQMIQDYEYYYKTESGK 2130
                    .|..|::.|::.:..|:.|.|...   .::|.|::|....|             ..|
plant   481 LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPK-------------DAK 532

  Fly  2131 VLKEPIKFNVLITTFEMIVT--------DYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNL 2187
            :|.:.   :|:|||:.::.:        |:..:.|..|...|:||||.:||...::......|..
plant   533 LLSQS---DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVA 594

  Fly  2188 EHRVLLSGTPLQNNISELFSLLNFLEPSQFSS--------QEEFMSEFGSLRTEEEVNKLQALLK 2244
            :.|..|:|||:|||:.:|:|||.||....:.:        |:.|  |.|.   |..:..:|::||
plant   595 DRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPF--EEGD---ERGLKLVQSILK 654

  Fly  2245 PMMLRRLKDDVEKS------LAPKEETIIEVELTNIQKKYYRGILEQN----FSFLKKGTTSANI 2299
            |:||||.|...::.      |.|.:..:|..||:..::.:|..:.:::    ..|:::|....|.
plant   655 PIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNY 719

  Fly  2300 PNLMNTMMELRKCCIHPYL--------------------LNG-----------------AEEQIQ 2327
            .:::..::.||:||.||:|                    |:|                 .:|.::
plant   720 ASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVE 784

  Fly  2328 YDFKSQHGEDP----------------------------------------------------ES 2340
            ...|.:.||.|                                                    ||
plant   785 ELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELITAPTES 849

  Fly  2341 YY-----KNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRI 2400
            .:     ||.:.|:....|::: |..|:::|.:.::|||....||:|:..|....:.|.|:||.:
plant   850 RFQVDVEKNWVESSKITALLEE-LEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTL 913

  Fly  2401 RGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQ 2465
            ....|::.:..:|:.|| ..|.|:..||||:|||||||....:.|..|||..:.||..|.|||||
plant   914 SQQQREKVLKEFSEDGS-ILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQ 977

  Fly  2466 RKMVKIYRLLCRNTYEREM 2484
            .|.|||.|.:.:.|.|..|
plant   978 TKEVKIRRFIVKGTVEERM 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 53/331 (16%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 9/81 (11%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 13/63 (21%)
PLN03142 2029..>2606 CDD:215601 161/674 (24%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
RAD5NP_197667.1 UBA_like_SF 9..48 CDD:473871 8/43 (19%)
HIRAN 116..224 CDD:400928 23/143 (16%)
HepA <339..1011 CDD:440319 164/696 (24%)
RING_Ubox 789..842 CDD:473075 3/52 (6%)
Blue background indicates that the domain is not in the aligned region.

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