DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and CHR40

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_189077.1 Gene:CHR40 / 822023 AraportID:AT3G24340 Length:1132 Species:Arabidopsis thaliana


Alignment Length:1255 Identity:284/1255 - (22%)
Similarity:465/1255 - (37%) Gaps:325/1255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1440 DPASTPSRRDRKRSTARSRRNANSEEGGSARKNRGSLS-------------------AKALKKRR 1485
            |..|..:||.|.|:.:......|..:|.|..:...||.                   :...||||
plant     2 DMTSCVARRTRSRTESYLNSILNKSKGISGEEEDQSLGCVNSRTEKRRVNMRDACSPSPRKKKRR 66

  Fly  1486 NRGRIVPESDGEDDTLDRTPPPSPPPDSEMDSNKRRSSRNTQRKKY-IDDVMLRFSDDENSLLVA 1549
            .|     :.|.:|....||..|....|   |.|...:|.|.|.|.: ..|.:..|..|:.:|   
plant    67 RR-----KDDDDDVVFVRTEYPEGKRD---DENVGSTSGNLQSKSFDFGDRVCDFDADDRNL--- 120

  Fly  1550 SPVKKDKKPSANASNSNAGSDVEKTEPQSGAEGDAAQEVGE-EKSNLPLDESSQLEASSSTSAVA 1613
                   .....|||.|...|           .|....||. ::.|..:::...:.::|..|   
plant   121 -------GCEEKASNFNPIDD-----------DDDVVFVGTVQRENDHVEDDDNVGSASVIS--- 164

  Fly  1614 EKERQISTDAANAAMSSKPNYVYINTGDEDSMVV--------QLVLAMRMGKR--ELILDKPKEK 1668
              .|....|..:|.:|.|.|  .::..|:|.:|.        |.|..:..|..  :::||....:
plant   165 --PRVCDFDEDDAKVSGKEN--PLSPDDDDDVVFLGTIAGENQHVEDVNAGSEVCDILLDDANLR 225

  Fly  1669 APE------------PKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVD 1721
            ..|            ...|:|:..|:|..||..|     :..||.:    ||.|:.::..|.:.|
plant   226 GEEKTYVSDEVVSLSSSSDDEEDPLEELGTDSRE-----EVSGEDR----DSGESDMDEDANDSD 281

  Fly  1722 SKE-ESEPDDSKKSDEDNKDKDKMEVDDEVG--KSDK--ESKPEE------QSETVKTEENSKAI 1775
            |.: ..|..||  ||.::.|.|.:..:||.|  :.|.  |..|.|      :|.|.:.:.|...|
plant   282 SSDYVGESSDS--SDVESSDSDFVCSEDEEGGTRDDATCEKNPSEKVYHHKKSRTFRRKHNFDVI 344

  Fly  1776 EEDKSSTVLTADHAKEPETVLEKM-EVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATT-EKNKE 1838
            .....|.:.:.|..||.....:|: |||.:    :..|.: |.|.||..:...|.|..: .:.:|
plant   345 NLLAKSMLESKDVFKEDIFSWDKIAEVDSR----EDPVVR-ESSSEKVNEHGKPRERRSFHRVRE 404

  Fly  1839 SLEIEGEK----ERVKEGEESVKKENDEKTEADME-NKPEPVFIDVEEYFVKYRNFSYLHCEWRT 1898
            ...:.||.    |::.:|||::....::....::. ...|||.|:                  :|
plant   405 KNHLNGESFYGGEKLCDGEETINYSTEDSPPLNLRFGCEEPVLIE------------------KT 451

  Fly  1899 EEELLKGDRRVAAKIRRFQQKQS--QQLNIFENIEDEPFNQDFTEVDRVLDMSVH---TDETSGE 1958
            |||               ::..|  :.:|:...:|....:......|.:.....|   .|:..|.
plant   452 EEE---------------KELDSLWEDMNVALTLEGMHSSTPDKNGDMLCSKGTHDFVLDDEIGL 501

  Fly  1959 TTKHYLVKWKSLPYEDCTWELEEDVD----NDKIEQYLRFNK---------IPQRSEWKSKKRPH 2010
            ...|            |.:...|..|    .||....:..||         :|.|.|:.:.   .
plant   502 KCVH------------CAYVAVEIKDISPAMDKYRPSVNDNKKCSDRKGDPLPNRLEFDAS---D 551

  Fly  2011 PE------------LWKKLEKTPVYKGG--NSLRPYQLEGLNWLKFSWYN--------------- 2046
            |.            :|:       |..|  ::|.|:|.||   .:|.|.|               
plant   552 PSSFVAPLDNIEGTVWQ-------YVPGIKDTLYPHQQEG---FEFIWKNLAGTTKINELNSVGV 606

  Fly  2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVY-- 2107
              :..||::.:.|.|||..::.|:.|..:.......:||||.:.:..|:.|...| ::|:..|  
plant   607 KGSGGCIISHKAGTGKTRLTVVFLQSYLKRFPNSHPMVIAPATLMRTWEDEVRKW-NVNIPFYNM 670

  Fly  2108 ----------------------HGSVTSKQMIQ----------DYEYYYKTESGKVLKEPIKFNV 2140
                                  |.|:...:::.          .|..|.|..:.|..:....|..
plant   671 NSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQVFRR 735

  Fly  2141 LITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISEL 2205
            ::          ::|..    |.|:||.|..:|::..:.:.|.::..|.|:.||||..|||..||
plant   736 ML----------VELPG----LLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKEL 786

  Fly  2206 FSLLNFLEPSQ---FSSQEEFMS------EFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAP 2261
            .::|....|:.   .||:...:|      |.|.:..|..:..|:|::...:.......:::||..
plant   787 SNVLCLARPADKDTISSRIHELSKCSQEGEHGRVNEENRIVDLKAMIAHFVHVHEGTILQESLPG 851

  Fly  2262 KEETIIEVELTNIQKKYYRGI-LEQN-FSFLKKGTTSANIPNLMNTMMELRKCC---------IH 2315
            ..:.::.:.....|||....| ..|| |.|..|.:..:..|:|.       .||         |.
plant   852 LRDCVVVLNPPFQQKKILDRIDTSQNTFEFEHKLSAVSVHPSLY-------LCCNPTKKEDLVIG 909

  Fly  2316 PYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANG---HRVLIFSQMVR 2377
            |..|                    ...|.|.|...:.|....|:..::.:|   .:||::||.:.
plant   910 PATL--------------------GTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLVYSQYID 954

  Fly  2378 CLDILEDYLVYRKYPFE-----RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA 2437
            .|.::.:.|:......|     .:.|::....||..||.::||.|...|.|..|||...||:|..
plant   955 TLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVG 1019

  Fly  2438 ADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSM 2502
            |..|:|.|..|||..:.||.:|..||||::.|.||.|:.::|.|...:.|.|.|..:.:.|..|.
plant  1020 ASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSST 1084

  Fly  2503 NTQGSKDGNNKQLSKKEIED 2522
            | :..|..||:.:||..|.|
plant  1085 N-EKDKPINNEVVSKDRILD 1103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171 18/78 (23%)
PTZ00121 <1419..1923 CDD:173412 122/545 (22%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 11/67 (16%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 10/64 (16%)
PLN03142 2029..>2606 CDD:215601 141/573 (25%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
CHR40NP_189077.1 HepA <571..1082 CDD:440319 133/555 (24%)
DEXHc_ATRX-like 577..830 CDD:350765 59/270 (22%)
Blue background indicates that the domain is not in the aligned region.

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