DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and Rad54l2

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_109655.2 Gene:Rad54l2 / 81000 MGIID:1933196 Length:1467 Species:Mus musculus


Alignment Length:1093 Identity:256/1093 - (23%)
Similarity:431/1093 - (39%) Gaps:304/1093 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1734 SDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEK 1798
            |||.....|. ::|.:|...|:|.: ||:.|.|..||:.:..||....           :|.||.
Mouse     2 SDESASGSDP-DLDPDVELEDEEEE-EEEEEEVAVEEHDRDDEEGLLD-----------DTSLEG 53

  Fly  1799 M---EVDEKANDDQ-------SAVSKAEGSDE-----KSTDDSNPEEATTEK------NKESLEI 1842
            |   |..:...|.|       :..|::|.|::     |.....:|::...:|      |...|..
Mouse    54 MCGTEHAQLGEDGQRPPRCTSTTSSQSEPSEQLRHQGKILASEDPKKKRAQKPSHMRRNIRKLLR 118

  Fly  1843 EGEKERVKEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGD- 1906
            |.:.|.|.:..:..:.|..::.|...:....|:              ..:..|:..||.:|:.. 
Mouse   119 EDQLEPVTKAAQQEELERRKRLEQQRKEYAAPI--------------PTVPLEFLPEEIVLRASD 169

  Fly  1907 -----RRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSG-ETTKHYLV 1965
                 .||.|       ::...|:.....|||..::     |.|:::|      || |.|.|.:.
Mouse   170 GPQLPPRVLA-------QEVICLDSSSGSEDEKSSR-----DEVIELS------SGEEDTLHIVD 216

  Fly  1966 KWKSLPYEDCTWELEEDVD---NDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKG-- 2025
            ..:|:..||   |.||...   ||.:.|:....::.....       ||.     |:..|:..  
Mouse   217 SSESVSEED---EEEEKGGTHVNDALNQHDALGRVLVNLN-------HPP-----EEENVFLAPQ 266

  Fly  2026 -GNSLRPYQLEGLNWL---------KFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPF 2080
             ..:::|:|:.|:.:|         :|...:...||||..||||||:|.::|:..::.:......
Mouse   267 LARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHTPAKTV 331

  Fly  2081 LVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKF------- 2138
            |.|.|::|:.||..||..|......:...|...:...:.::.:...:..|.:....|.       
Mouse   332 LAIVPVNTLQNWLAEFNMWLPAPEALPADSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSE 396

  Fly  2139 -NVLITTFEM---------IVTD------------YMDL----------KAFNWRLC-------V 2164
             .||:..:||         :.|.            .:||          :.|...||       :
Mouse   397 GGVLLMGYEMYRLLTLKKSLATSRPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVI 461

  Fly  2165 IDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEF-- 2227
            .||.||:||......:.|:.:....||:|:|.|||||:.|.:.:::|:.|....:::||.:.|  
Mouse   462 CDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFER 526

  Fly  2228 ----GSL--RTEEEV-------NKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYY 2279
                |..  .|.::|       :.|.:||:..:.||....::..|..|||.:|.|.|:.||:..|
Mouse   527 PILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLY 591

  Fly  2280 RGILEQNFSFLKKGTTSANIPNL-MNTMMELRKCC---IHPYLL-------NGAEEQIQYDFKSQ 2333
            ...:::   |...||:..    | :|.:.....||   .||.:|       |.|.||   |...:
Mouse   592 TQFMDR---FRDCGTSGW----LGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQ---DLDVE 646

  Fly  2334 H------------------GED---PES------------------------------------- 2340
            .                  |||   |.|                                     
Mouse   647 ELGSAGTSARCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKELLTN 711

  Fly  2341 YYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP------------- 2392
            |...::.::.||||:..|:.:....|.::|:|||.:..|.::|::|..|..|             
Mouse   712 YQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKW 776

  Fly  2393 -----FERIDGRIRGNLRQEAIDRYSKPGS-DRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQ 2451
                 :.|:||......|:..|::::.|.: ..::|||.|:||.||:||..|:.|:::|:.|||.
Mouse   777 VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPC 841

  Fly  2452 NDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLS 2516
            :|.||..|.:|.||:|...||||:...|.|::::|:...|.|:...|:..:|..       ...:
Mouse   842 HDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPM-------LNFT 899

  Fly  2517 KKEIEDLL----KKGAYGAVMDDDNAGDKFCEEDIDSILK----RRTQVITMESEKGSTFSKASF 2573
            :||:|:||    |:.|....:  |..|.|      :|:|:    :...:||.|     .|...|.
Mouse   900 RKEVENLLHFVEKEPAPQTSL--DIKGIK------ESVLQLACLKYPHLITKE-----PFEHESL 951

  Fly  2574 AASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRY 2626
            ..  ||.|..:      ||..||      |.::...||...|.|..|....:|
Mouse   952 LL--NRKDHKL------TKAEKK------AAKKSYEEDKRTSVPYTRPSYAQY 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 44/215 (20%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 10/72 (14%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 17/61 (28%)
PLN03142 2029..>2606 CDD:215601 181/742 (24%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Rad54l2NP_109655.2 HepA 110..890 CDD:440319 195/836 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..236 17/63 (27%)
DEXHc_ARIP4 271..547 CDD:350827 64/275 (23%)
DEAH box 463..466 2/2 (100%)
LXXLL motif 1 551..555 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 650..671 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1027..1046
PHA03247 <1112..1445 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1171
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1185..1213
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1282
LXXLL motif 2 1329..1333
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1445..1467
Blue background indicates that the domain is not in the aligned region.

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