DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and rad54l2

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001076824.1 Gene:rad54l2 / 733747 XenbaseID:XB-GENE-5829376 Length:1396 Species:Xenopus tropicalis


Alignment Length:1608 Identity:323/1608 - (20%)
Similarity:565/1608 - (35%) Gaps:525/1608 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1715 SSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDK 1779
            |.|....|:.|.:|:|.::.:||::|.|: |.::|..:.|.:...|:..:.:..:..:.|:.|| 
 Frog     2 SDASISGSEPELDPEDMEEEEEDDEDDDE-EEEEEEDEEDNDGDDEDDKQDINEKSQNAALGED- 64

  Fly  1780 SSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEG 1844
                       .||...|..:     ....|..|..|..:.|......|  |...:|...|..|.
 Frog    65 -----------SPEQGEEGWK-----RSTTSGQSGQESDEAKKKRLQKP--ANLRRNIRKLLRED 111

  Fly  1845 EKERVKEGEESVKKENDEKTEADMENKP-----EPVFIDV--EEYFVKYRNFSYLHCEWRTEEEL 1902
            :.|.|.:..:..:.|..::.|...::.|     .||.:|.  ||..::..:.|.|    ...:|:
 Frog   112 QLESVTKTAQQEELERRKRLEQQRKDYPLPLTLPPVSLDFLQEEIELRAADVSQL----VKSQEI 172

  Fly  1903 L-----KGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVD--RVLDMSVHTDETSGETT 1960
            :     .|:.....|::.            .:|:||.......|.|  ::.|.:..|:|..|   
 Frog   173 ICLDSSSGESDDEGKVKS------------HSIKDEIIELSSGEEDNLQISDNADSTNEVDG--- 222

  Fly  1961 KHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKG 2025
                         |.|.|......||.:.|.....::.....       ||...|.:...|  :.
 Frog   223 -------------DITTENSGSHVNDALNQADHLGRVLVNIN-------HPPNEKDIFLAP--QL 265

  Fly  2026 GNSLRPYQLEGLNWL---------KFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFL 2081
            ..:::.:|:.|:.:|         :||..:...||||..||||||:|.::|:..::::......|
 Frog   266 ARAVKSHQIGGIRFLYDNLVESLERFSGSSGFGCILAHSMGLGKTLQVISFLDVLFQHTSAKTVL 330

  Fly  2082 VIAPLSTIPNWQREFEGW--------TDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKE-PIK 2137
            .|.|::|:.||..||..|        .|.|..:..........:.| |:.......||:.: ...
 Frog   331 AIVPVNTLQNWLAEFNMWLPPPESLPKDHNQELVQPRAFKVHTMND-EHKTTAARAKVVNDWATD 394

  Fly  2138 FNVLITTFEM------------------------IVTDYMD-------LKAFNWRL-------CV 2164
            ..||:..:||                        ::.|..:       ||.....|       .:
 Frog   395 GGVLLMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQQEMLKGIEKALSRPGPDVVI 459

  Fly  2165 IDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2229
            .||.||:||.:....:.|:.:....||:|:|.|||||:.|.:.:::|:.|....:::||.:.|..
 Frog   460 CDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFER 524

  Fly  2230 -----------------LRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKK 2277
                             :|....|  |.:||:..:.||....::..|..|||.:|.|.|:.||:.
 Frog   525 PILNGQCVDSTPQDKRLMRYRSHV--LHSLLEGFVQRRGHTVLKAQLPFKEEHVILVRLSKIQRD 587

  Fly  2278 YYRGIL--------------------------------------------EQNFSFLKKGTT--- 2295
            .|...:                                            ||:......||.   
 Frog   588 LYTEFMNRFRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRC 652

  Fly  2296 ---SANI---PNLMNTMM-------ELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLIL 2347
               |..|   ||.:..:|       :|:...::| ....|.:.:.|::..:...|   |....:.
 Frog   653 NAQSGKIKVEPNSLGALMGETAHTKQLQGIVLNP-SHEKANQVVTYEWAKEILSD---YIPGQLQ 713

  Fly  2348 SAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP------------------FE 2394
            ::.||||:..|:.:....|.::|:|||.:..|.|:|::|..||.|                  :.
 Frog   714 NSPKMVLLFHLIEESMRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYY 778

  Fly  2395 RIDGRIRGNLRQEAIDRYSKPGSDR-FVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQA 2458
            |:||....:.|:..|::::.|.::: ::|||.|:||.||:||..|:.|:::|:.|||.:|.||..
 Frog   779 RLDGSTSASERERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVC 843

  Fly  2459 RCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDL 2523
            |.:|.||||...||||:...|.|::::|:...|.|:...|:..:|.:       ...:::|:|:|
 Frog   844 RVYRYGQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDLNPE-------VNFTRREVENL 901

  Fly  2524 LKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPD 2588
            |                .|.||:.|:         :.:....|:|.:|                 
 Frog   902 L----------------HFVEEEPDA---------SRQHLDSSSFHEA----------------- 924

  Fly  2589 FWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLR 2653
                      :...||.  :...|:..||        :.||.::....|:...           .
 Frog   925 ----------VLQKACL--QYPHLITKEP--------FQHESLLLDRKEQKLT-----------L 958

  Fly  2654 SRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQY--------GNWAKSECFKVEKGLLSFG 2710
            :.::..||....||:.:   :|..|.:..       ||        ||            :.:|.
 Frog   959 AEKKAAKRGYEEEKRAS---VPYTRPSYT-------QYYPAPDHNLGN------------IPAFS 1001

  Fly  2711 WGRWSELLELGQFK-----RGWRDVDVEDCARIILL------------------YCLQVYKGDEK 2752
            ...|..|:: |..:     |..:...:....|.:.:                  |..:.....:|
 Frog  1002 QRHWRPLMK-GDDRPVASVRPLQSTPIPMLPRHVSVNHPGSASASVHPYNFPVNYLQRAGVLVQK 1065

  Fly  2753 IKTFIWDLITP--TEDGEVQ-KISRDHSGLHNLVPRGRNG-------GK------SNKESTG-VS 2800
            :.| ..|::.|  |...:|| :||...| :|  |.||..|       |:      |.|:.:| |.
 Frog  1066 VVT-TTDIVIPGMTTSTDVQARISAGES-IH--VIRGTKGTYIRTSDGRIFAIRASGKQKSGEVR 1126

  Fly  2801 TPAPGSASGSNSGN-TTPAHKSSALDGSDKDS-------------GGINASAVAAAVTSIH---- 2847
            ..|...|.||::.. :...|.:|:....|.:.             ..:...|.|||....|    
 Frog  1127 RQATSGAQGSSAPYLSNGRHSTSSPSQQDSEDPPRPLSPDSPEILNELQKYADAAAARGSHTAPQ 1191

  Fly  2848 -----------------------DP----NHW--SKKEKYDADAY--------LEGAYKKHLGRH 2875
                                   ||    :||  :|:..|...:|        .......:|.|.
 Frog  1192 LQNLGLHHQGINPAPKLQPRKRKDPQDQSSHWPSNKRNPYSQLSYPNTGGFGVTPSTMNHNLVRS 1256

  Fly  2876 ANKVLL-------RVRMLYYIQHEVIG-DFVQQ--IKDNTPISELPIRPP--------------- 2915
            :|.|.:       ..::...:.....| ..||.  :..::..|..|..||               
 Frog  1257 SNPVFMGPGGGSSHFQLPSLLSDPQTGLPLVQDSLLTHSSGTSSAPSVPPHYLLPRGFPLPFSQS 1321

  Fly  2916 ---------PTPDQV-----PSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGA 2966
                     |.|.|:     |::  ||        ..|:......:...:|.|.           
 Frog  1322 LLPQTRMFAPYPSQILNRGLPTN--NP--------ASTFPGYLSSHSNYQASPG----------- 1365

  Fly  2967 AGDDLAVTS---LPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTG 3011
                   ||   ||..|.:..|..:||           :|.|..::||
 Frog  1366 -------TSSRPLPSGETELGSCEEDG-----------RDDDVVEVTG 1395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 44/219 (20%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 13/78 (17%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 12/59 (20%)
PLN03142 2029..>2606 CDD:215601 166/728 (23%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
rad54l2NP_001076824.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 26/120 (22%)
DEXHc_ARIP4 269..545 CDD:350827 63/276 (23%)
HepA <272..885 CDD:440319 152/619 (25%)
DEAH box 461..464 2/2 (100%)
LXXLL motif 1 549..553 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1117..1168 11/50 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1194..1250 7/55 (13%)
LXXLL motif 2 1273..1277 0/3 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1396 18/95 (19%)
Blue background indicates that the domain is not in the aligned region.

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