DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and Rad54b

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001034645.1 Gene:Rad54b / 623474 MGIID:3605986 Length:886 Species:Mus musculus


Alignment Length:920 Identity:230/920 - (25%)
Similarity:396/920 - (43%) Gaps:218/920 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1767 KTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKSTD----DSN 1827
            |:.:.::.|...:|:    ||.:||    :.||..|.|.         .:|:::...|    .||
Mouse    13 KSFKKTRFIPPGRSN----ADVSKE----ITKMSPDPKL---------FQGAEQSQNDPGVCSSN 60

  Fly  1828 PEEATTEKNKESLEIEGEKERVKEGEE-----SVKKENDEKTEADMENKPEPVFIDVEEYFVKYR 1887
            |           ...||....|.:|..     .|...:.|.||:..:.         ||.....:
Mouse    61 P-----------CPSEGIPREVGDGTRVDPLPPVHSASKEITESKAQE---------EEASSLLK 105

  Fly  1888 NFSYLHCE-WRTEEELLKGDRRVAAKIRRFQQKQSQQLNI-------FENIEDEPFNQDF----T 1940
            .||.:.|: .:.:.:..:||..:..:.|.|..|..:..:|       |:::|:....|..    .
Mouse   106 YFSVVWCKASKKKHKKWEGDAILIVRGRSFTLKDLEGKDIGRGIGYKFKDLENVEEGQTLIIGGK 170

  Fly  1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKS 2005
            |:: :|......|..||:..:|    ....|....:....:...|.       |..:.|.::.:.
Mouse   171 EIE-ILGTISSDDFNSGKCFQH----GSGSPAVPSSQAARKCFSNP-------FKSVCQSTQAQG 223

  Fly  2006 KK-------------------RP---HPELWKKLEKTPVYKG------GNSLRPYQLEGLNWLKF 2042
            |:                   ||   |..::.: ..:|:...      .:.|||:|.:|:.:|  
Mouse   224 KRWNDCRPRHNPCTPNALVMPRPDENHQRMFNR-HCSPIVDVVIDPHLVHHLRPHQKDGIIFL-- 285

  Fly  2043 SWYNTHNC------------ILADEMGLGKTIQSLTFVHSVYEYGIRGPF---------LVIAPL 2086
                 :.|            |||||||||||:|.::.:.::.   .:||:         |::.|.
Mouse   286 -----YECVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQ---CQGPYGGKPVIKKTLIVTPG 342

  Fly  2087 STIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIK---FNVLITTFEMI 2148
            |.:.||::||:.|.        ||...|....|.::       || :|.|.   .:|||.::||:
Mouse   343 SLVNNWRKEFQKWL--------GSERIKIFTVDQDH-------KV-EEFINSTFHSVLIISYEML 391

  Fly  2149 VTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLE 2213
            :.....:|...:.|.:.||.|||||.:.|....|..|:.|..|:|:|||:||::.|.|:|::|:.
Mouse   392 LRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVN 456

  Fly  2214 P------SQF---------------SSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEK 2257
            |      |.:               ||:||  .|.|..|..|    |..|....:|||.::.:.|
Mouse   457 PGILGSLSSYRKIYEEPIIISREPSSSKEE--RELGERRATE----LTRLTGRFILRRTQEVINK 515

  Fly  2258 SLAPKEETIIEVELTNIQKKYYRGIL-EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
            .|.||.|.::......:|.:.||.:| .|:..|..:|... |..:|: .:..|:|.|.||.||..
Mouse   516 YLPPKIENVVFCRPGALQIELYRKLLRSQSVRFCLQGLLE-NSAHLI-CIGALKKLCNHPCLLFS 578

  Fly  2322 AEEQIQYDFKSQHGEDPESYYKNL---ILS---------------AGKMVLIDKLLP---KLKAN 2365
            :.:..::....:..|:     :||   :||               :||:.::.|||.   :|:..
Mouse   579 SVKGKEFSSSCEENEE-----RNLCQGLLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPT 638

  Fly  2366 GHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGG 2430
             .:|::.|...:.|::||:......|...|:||:...:.||..:|.::...|..|:|||.:||||
Mouse   639 -EKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGG 702

  Fly  2431 LGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLD 2495
            :|:||.....:|:||.||||..|:||.:|..|.||:..|.|||||...|.|.:::.:...|.||.
Mouse   703 VGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLS 767

  Fly  2496 KAVLQSMNTQGSKDGNNKQLSKKEIEDL--LKKGAYGA---VMDDDNAGDKFCEEDIDS--ILKR 2553
            .||:..     ::...:.|.|.:|:::|  |.:.::..   ::|.:..|:|...||...  :..|
Mouse   768 GAVVDL-----TRSSEHIQFSVEELKNLFTLHESSHCVTHDLLDCECTGEKGHTEDASEGPVASR 827

  Fly  2554 RTQVITMESE 2563
            :.|....:|:
Mouse   828 QCQFGPQKSD 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 34/165 (21%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 14/72 (19%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 9/61 (15%)
PLN03142 2029..>2606 CDD:215601 177/609 (29%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Rad54bNP_001034645.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 24/109 (22%)
HepA <274..772 CDD:440319 164/537 (31%)
DEXHc_RAD54B 274..508 CDD:350824 79/265 (30%)
DEGH box 409..412 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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