DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and chd1

DIOPT Version :9

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_009303375.1 Gene:chd1 / 563236 ZFINID:ZDB-GENE-030131-7120 Length:1778 Species:Danio rerio


Alignment Length:1769 Identity:491/1769 - (27%)
Similarity:778/1769 - (43%) Gaps:399/1769 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1512 DSEMDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKDKKPSANASNSNAGSDVEKTEP 1576
            :.|..||....|.|              ||||:.....|. ......|:::|:|.:||....:..
Zfish     6 EDESVSNSSGESSN--------------SDDESGSGSGSG-SGSSSSSSSSSSSQSGSSDSGSGS 55

  Fly  1577 QSGAEGDAAQEVGEEKSNLPLDESSQLEASSSTSAVAEKERQISTDAANAAMSSKPNYVYINTGD 1641
            .||::.|:..|..:||:    |:.::::.:                   |..:|.|:.       
Zfish    56 DSGSQSDSDSEKSKEKN----DQDNKIDGA-------------------AFWNSNPSI------- 90

  Fly  1642 EDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLT 1706
               :.||....:|                  ||..::.:|.:.::.....||...:..||    .
Zfish    91 ---LTVQRTAMLR------------------KQQIQQQQLQQQSSSNTGSDEDSSSSDES----D 130

  Fly  1707 DSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSET------ 1765
            |..:::.:.|..:.||...|....|..|.|:..:.|:...|.|.....|..||..::..      
Zfish   131 DDSKSRSKGSGSDSDSGSGSGSGSSDSSAEEEANSDESVSDYEPSHKVKSRKPSNKANARNGRNN 195

  Fly  1766 ---VKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSN 1827
               .|...:|.:.:||.....|..  .:...||....:.||:...|...:.:..|.|...     
Zfish   196 KAPKKKPSHSSSDDEDDYKKALAG--PRRQATVNVSYKEDEELKTDSDDLVEVCGEDVPP----- 253

  Fly  1828 PEEATTEKNKESLEIEGEKERVKEGEE---SVKKENDEKTEADMENKPEPVFIDVEEYFVKYRNF 1889
            |||...|..:..:|:...::.|.....   :|:.:.|.....|...:|..|     :|.:|::|:
Zfish   254 PEEDEFETLERVMEMRIGRKGVTGAVTTVYAVEADGDPNANFDPNRQPGEV-----QYLIKWKNW 313

  Fly  1890 SYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQ--------------LNIFENIEDEPFNQDFT 1940
            |::|..|.|||.|.:.:.:...|:..|::|:.::              .|..:.:.|:..:| :.
Zfish   314 SHIHNTWETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKAASPEDVEYFNCQQELMDDLHSQ-YQ 377

  Fly  1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWE---LEEDVDNDKIEQYLRFNK---IPQ 1999
            .|:|::.   |:::.|......||.||:.|||.:|:||   |........|::|:..|:   ||.
Zfish   378 LVERIIG---HSNQKSAAGYPDYLCKWQGLPYSECSWEDGALISKKFQKCIDEYMSRNQCKTIPS 439

  Fly  2000 RSEWKSKKRPHPELWKKLEKTPVYKGGN--SLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTI 2062
            |.....|:||.   :..::|.|.|.||.  .||.|||:||||:..||...::|||||||||||||
Zfish   440 RDCKVLKQRPR---FVPMKKQPHYIGGEGLELRDYQLDGLNWMAHSWCKGNSCILADEMGLGKTI 501

  Fly  2063 QSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWTD-MNVVVYHGSVTSKQMIQDYEYYYK 2125
            |:::|::.:: |:.:.||||::.||||:.:||||.:.|.. ||||||.|.:.|:.||:.:|:.:.
Zfish   502 QTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWAPLMNVVVYLGDINSRNMIRTHEWMHP 566

  Fly  2126 TESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHR 2190
            .      .:.:|.|:|:||:|:::.|...|...:|....:||||||||.:..|.:.:.:....||
Zfish   567 Q------TKRLKLNILLTTYEILLKDKSFLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHR 625

  Fly  2191 VLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDV 2255
            :|::||||||::.||:|||:|:.|.:|.|.|.|..|.|..| :.....|...|:|.:|||:|.||
Zfish   626 LLITGTPLQNSLKELWSLLHFIMPEKFHSWEMFEEEHGKGR-DSGYTSLHKELEPFLLRRVKKDV 689

  Fly  2256 EKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLN 2320
            ||||..|.|.|:.||::.:||:||:.||.:|:..|.|| |..:....:|.||||:|||.|.||:.
Zfish   690 EKSLPAKVEQILRVEMSAVQKQYYKWILTRNYKALSKG-TKGSTSGFLNIMMELKKCCNHCYLIK 753

  Fly  2321 GAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDY 2385
            ..::...|:  .|.|      .::|:.|:||::|:||||.:||..||||||||||||.||||.:|
Zfish   754 PPDDNEFYN--RQEG------LQHLVRSSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEY 810

  Fly  2386 LVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNP 2450
            |.||::.|:|:||.|:|.:|::|:|.::..||:.|.|||.|:||||||||.:||||:|:||||||
Zfish   811 LKYRQFLFQRLDGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 875

  Fly  2451 QNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNT-------QGSK 2508
            |||||||||.|||||:|.|.||||:.:.:.|.|:.::|..|:.||..|:|.|:|       .|:.
Zfish   876 QNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAA 940

  Fly  2509 DGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKG-------- 2565
            ..::...:|:|:..:||.||.....:.:....:..|.|||.||||..   |.|::.|        
Zfish   941 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAE---TRENDPGPSTVGEEL 1002

  Fly  2566 -STFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHE 2629
             |.|..|:|:        .::|.          :||.|....|...|.::.|..||...:....:
Zfish  1003 LSQFKVANFS--------MMEDE----------EIDMDTERNDRNWDDIIPEDHRRRLEEEERQK 1049

  Fly  2630 DVMELN--------SEESSNENSDEEGGIGLRSRRRK-------EKRDRAREKK-GNDEYIPRER 2678
            ::.|:.        :::..|.|.:|    |.|||.|:       ...||.|.|| |....||||.
Zfish  1050 ELAEIYLLPRMRKCAKQQMNFNGNE----GRRSRNRRYSASDSDSVSDRKRPKKRGRPRTIPREN 1110

  Fly  2679 DALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDVDVEDCARIILLYC 2743
                ..|..:.:...:.||  :|      .|| |....|..:.      ||.::.|         
Zfish  1111 ----IKGFTDAEIRRFIKS--YK------KFG-GPLERLDAIA------RDAELVD--------- 1147

  Fly  2744 LQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNK------ESTGVSTP 2802
                |.:..::.    |.....:|.::.:..:..|     |...:||:..|      ..:||...
Zfish  1148 ----KSEHDLRR----LAETVHNGCLRTLKENPCG-----PERTSGGRRGKVKGPTFRISGVQVN 1199

  Fly  2803 APGSASGSNSGNTTPAHKSSALDGSDKDSGGINASAVAAAVTSIHDPNHWSKKEKYDADAYLEGA 2867
            |  ....|:.....|.||:...|..::....|...:.||     |....|.|::           
Zfish  1200 A--KLVISHEEELAPLHKAIPADPEERKRYIIPCHSKAA-----HFDIEWGKED----------- 1246

  Fly  2868 YKKHLGRHANKVLLRVRMLYYIQHEVIGDFVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCD 2932
                                                                            |
Zfish  1247 ----------------------------------------------------------------D 1247

  Fly  2933 KSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDDG 2997
            .|||:|.|::|...:..::.||:|             :|....||          ||.|:.....
Zfish  1248 SSLLIGIYEYGYGSWEMIKMDPDL-------------NLTHKLLP----------DDPDKKPQAK 1289

  Fly  2998 TTTTKDSDSTKLTGGDNKDSLLDPERPSSSGKSSSENASGGNDKTES----ENDATTVSESSYKS 3058
            ...|:.....||...|    |...|....:|.:.|.|......|.::    ..|.|....|:..|
Zfish  1290 QLQTRADYLIKLLSKD----LAKKEAQKQAGTAKSRNRKPRGKKNKAVKPKMEDVTNSLSSAPPS 1350

  Fly  3059 EVLPGKGSDLDVSVAQQDALSATP-ELAN--TSDPKM----NKNDAQVSASVSCDPADSSSPEAA 3116
            :    |.||.:....::|..:..| :|.|  ...|:.    .::|:.........|.:..:||..
Zfish  1351 D----KSSDEEDEKDEEDKETPPPVKLPNRRARVPERTVMEEEDDSDEDELEDAAPVEKDTPEKV 1411

  Fly  3117 GKAQGTGVQTGDAGELDIESEKKD-----NEKETKESTGDAPAVEAKKDSAAIA---RAEGDKTE 3173
            .|.             :::.|||:     .|:|.||.......::.:.||.|.|   :||     
Zfish  1412 VKK-------------EVKKEKKEEGRDSKEREVKEKEIKPEPLQREDDSPAEAVDIKAE----- 1458

  Fly  3174 SCTNNATTNISTTT 3187
                .|.|.:.|.|
Zfish  1459 ----KADTPVHTPT 1468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 BASP1 1554..1786 CDD:283191 44/240 (18%)
HepA 1676..2527 CDD:223627 323/893 (36%)
SDA1 <1693..>1854 CDD:283052 35/169 (21%)
CHROMO <1879..1919 CDD:237991 12/39 (31%)
Chromo 1941..1996 CDD:278797 17/57 (30%)
DEXDc 2048..2197 CDD:238005 62/150 (41%)
Helicase_C 2350..2464 CDD:278689 75/113 (66%)
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
chd1XP_009303375.1 CHROMO <298..340 CDD:237991 13/46 (28%)
Chromo 379..431 CDD:278797 17/54 (31%)
SNF2_N 471..752 CDD:278600 129/288 (45%)
DEXDc 487..632 CDD:238005 62/150 (41%)
HELICc 770..897 CDD:238034 82/126 (65%)
SrmB <774..>889 CDD:223587 75/114 (66%)
DUF4208 1480..1571 CDD:290618
PHA03118 1631..>1733 CDD:165391
DUF1777 1637..>1732 CDD:285811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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