DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and smarcad1b

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_005155692.3 Gene:smarcad1b / 563175 ZFINID:ZDB-GENE-091113-61 Length:955 Species:Danio rerio


Alignment Length:1104 Identity:297/1104 - (26%)
Similarity:470/1104 - (42%) Gaps:250/1104 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1498 DDTLDRTPPPSPP---------PDSEMDSNKR---------RSSRNTQRKKYIDDVMLRFSDDEN 1544
            |..:..||....|         .||:.||:..         |..|..:||..........||:|.
Zfish    21 DSVIPETPETKRPSGSSLSTAISDSDSDSDSEISGSSMMPVRKLRPRKRKAASSADEYSVSDEEE 85

  Fly  1545 SLLVASPVKKDKKPSANASNSNAGSDVEKTEPQSGAEGDAAQEVGEEKSNLPLDESSQLEASSST 1609
            .::    ||..::|:.:.:..   |..::.:|   |...|::.|.:.....||..|....|.|  
Zfish    86 EIV----VKTKRRPTHSRTTR---STSQQAQP---AHQKASETVTDIAHPSPLKTSGMAAADS-- 138

  Fly  1610 SAVAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQ 1674
              |.::.||....::..:.|.|...|......|:.       ..|...:|.:|.|.:.|.|...:
Zfish   139 --VQQRRRQQMCGSSQESDSRKGGRVSAADDSEEE-------GQRSKDQERMLRKLQRKFPHLNK 194

  Fly  1675 DEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNK 1739
            :|.:..|.|...                  |.|.   .||:..|..|...|||.|.|:.|.....
Zfish   195 NELRDVLQEHDW------------------LIDD---ALETLRMFSDLVVESEDDSSQTSTPAKH 238

  Fly  1740 DKDKMEV--DDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEK---M 1799
            .:...|.  ..:|.|.....||:.          |:.::..::|..:    ||:|  :|.|   :
Zfish   239 TRRVAETRPQAQVTKLSSPPKPKP----------SRPLDGTRTSQRI----AKQP--ILAKYTYV 287

  Fly  1800 EVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKE----GEESVKKEN 1860
            ..:|:.:|.:::|  ..|..:..:|.|   |.|..|.|..:....:...|.|    ...|:|   
Zfish   288 SSEEECSDSEASV--VNGLLDSDSDQS---EETLSKLKTEILCFFQSASVDELTLIAGCSLK--- 344

  Fly  1861 DEKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRV--AAKIRRFQQKQSQQ 1923
              |.:...|.:|...:.|:::...:....|         .|||.|.|.|  ..::.:....:.::
Zfish   345 --KAQKITELRPFKTWKDLDDAMRRRNGLS---------AELLAGCREVLKEREVVKGLMSKCEE 398

  Fly  1924 LNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKI 1988
            :::       ...||.|:|         .|:..|..|:                           
Zfish   399 ISV-------KLIQDVTQV---------MDKGPGSMTQ--------------------------- 420

  Fly  1989 EQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILA 2053
                                  ||:   |..|      ..|:||||.|||||.....|..:.|||
Zfish   421 ----------------------PEI---LSST------FQLKPYQLIGLNWLVLLHQNKLSGILA 454

  Fly  2054 DEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGW-TDMNVVVYHGSVTSKQMI 2117
            ||||||||||:::|:..:|:.|..||.|:..|.||:.||.||...| ....|:||:||...::.:
Zfish   455 DEMGLGKTIQAISFLAHLYQEGNHGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYM 519

  Fly  2118 QDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAF---NWRLCVIDEAHRLKNRNCKLL 2179
            : ||         :|.:.:::|::::|:.:.:.:..|...|   .....|.||.|.|||.|....
Zfish   520 R-YE---------ILNQIVEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRY 574

  Fly  2180 EGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEE--------V 2236
            ..|..:|.::|:||:|||||||:.||.|||||:.|:.|||....:::..|:::.||        :
Zfish   575 RHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRI 639

  Fly  2237 NKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPN 2301
            ...:.::||.:|||:|.:|.|.|..|||.:....::..|::.|..:|.:     .|.:::.....
Zfish   640 THAKLIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHK-----LKHSSNGEKRE 699

  Fly  2302 LMNTMMELRKCCIHPYLLN--------GAEEQIQYDFKSQHGEDP-------------------- 2338
            |.|.||:|||...||.|..        .|..::.....|....||                    
Zfish   700 LTNVMMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHRLCQ 764

  Fly  2339 -----ESYYKN--LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2396
                 ..|..|  ::|.:||:.|:.:||..||..|.||::|||....|||||.:|.:.|:.:.|:
Zfish   765 QYSALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRL 829

  Fly  2397 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2461
            ||....:.|...||::: ...|.|||||.|:|||||||||:|:.||::|.|.||.||.||:.|||
Zfish   830 DGSTPMSDRIGLIDQFN-TDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCH 893

  Fly  2462 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLK 2525
            |:||.|.||:.:|:.:::.|..|......||.|:    |.|.  .::||....| ..::..|||
Zfish   894 RVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLE----QEMT--ATQDGEEDTL-PDDMTTLLK 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171 1/1 (100%)
PTZ00121 <1419..1923 CDD:173412 93/453 (21%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 14/72 (19%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 7/57 (12%)
PLN03142 2029..>2606 CDD:215601 193/544 (35%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
smarcad1bXP_005155692.3 CUE 179..215 CDD:270465 12/56 (21%)
ComEA <329..377 CDD:441164 11/61 (18%)
HepA <429..926 CDD:440319 184/512 (36%)
Blue background indicates that the domain is not in the aligned region.

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