DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and chd4b

DIOPT Version :9

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_021322613.1 Gene:chd4b / 560622 ZFINID:ZDB-GENE-030131-4532 Length:1953 Species:Danio rerio


Alignment Length:2278 Identity:601/2278 - (26%)
Similarity:916/2278 - (40%) Gaps:647/2278 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1324 TPKAKKPKDPNDPNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPKA-GSADG 1387
            |||:||.|.......:.|          |||:|...|          |:..:.|.|.:| ..|:|
Zfish    27 TPKSKKKKKAKKSRESRT----------SKRQKVIRE----------EIAVSSPEVMEAIRMAEG 71

  Fly  1388 EAETTSGGTGVDGESPDYDDIPVSKIPRGSNED---EKEAEAGDETVDSVPDSAGDPASTPSRRD 1449
            |.|                            ||   ..|:|..|              ..||::.
Zfish    72 EEE----------------------------EDRVMRSESEGSD--------------YAPSKKK 94

  Fly  1450 RKRSTA---RSRRNANSEEGGSARKNRGSLSAKALKKRRNRGRIVPESDGEDDTLDRTPPPSPPP 1511
            :|||::   |.:.:|..:.|||..|:          ||:.     ||.:.|||            
Zfish    95 KKRSSSSKDRKKGSAGEKAGGSGGKS----------KRKE-----PEPEEEDD------------ 132

  Fly  1512 DSEMDSNKRRSSRNTQRKKYIDDVMLRFS-DDENSLLVASPVKKDKKPSANASNSNAGSDVEKTE 1575
            |.:.|..:.:||........:.|:...|: :|.|||.......:..:|...|.|....  |.|..
Zfish   133 DDDDDGQEPKSSSQLLADWGMKDIDYTFTQEDYNSLTNYKAFSQFVRPLIAAKNPKIA--VSKMM 195

  Fly  1576 PQSGAEGDAAQEVGEEKSNLPLDESSQLEASSSTSAVAEKERQI-------------------ST 1621
            ...||:.      .|..:|.|:..|:...|:.:.:.||.....:                   :|
Zfish   196 MVLGAKW------REFSTNNPMRGSASANAALAAANVAAAVESMVTKVDAGGGGGPALATAPPTT 254

  Fly  1622 DAANAAMSSKPNYVYINTGDEDSMVVQLVLA-MRMGKRELILDKPKEKAPEPKQDEEKSELDEAT 1685
            .||..|....|         :....|.|..| .:.||......|.|   |.||..::||:..:..
Zfish   255 TAAPVAAPPPP---------QQPPAVPLRKAKTKEGKGPNARRKTK---PTPKPQDKKSKAKKVA 307

  Fly  1686 TDKPE-GDEKFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDE 1749
            ..|.: |:.|.|.....::   |..|:..:|.::...|...|....:||: :.:|.|.||:.|.:
Zfish   308 PLKIKLGNFKRKRSSSGEE---DDGESDFDSFSVSDGSNSRSSRSKNKKA-KSSKKKKKMDEDAD 368

  Fly  1750 VGKSDKESKPE---EQSETVKTEENSKAIEEDKSSTVLTADHAKEPETV-----LEKMEVDEKAN 1806
            ..::|.:...|   :..|.:..:...:|..    ...|..|..:.||..     .||..:..:|.
Zfish   369 GYETDHQDYCEVCQQGGEIILCDTCPRAYH----MVCLDPDMERAPEGTWSCPHCEKEGIQWEAR 429

  Fly  1807 DDQSAVSKAEGSDEKSTDDSNPEEATTEKNKE--------------------------------- 1838
            ::.|     ||.:|  .||...::...|:..:                                 
Zfish   430 EESS-----EGEEE--NDDGRRDDGDVEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPP 487

  Fly  1839 ---------------SLEIEGEKERV---KEGEE----SVKKENDEKTEADMENKPEPVFIDVE- 1880
                           |..::|:.::|   :.||.    .|.:..|...||.   .|.|:....| 
Zfish   488 LPDIPNGEWICPRCLSPPLKGKVQKVLTWRWGEAPPPMPVPRPADLPAEAP---DPPPMIGRKER 549

  Fly  1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQ----LNI-FENIED-------- 1932
            |:|||:.|.||.||.|..|.:|   :.......|.:|:|...:    |.: .|..||        
Zfish   550 EFFVKWCNKSYWHCSWVQELQL---ELNCQVMFRNYQRKTDMEEPPNLEMGAEGDEDKSCKRKNK 611

  Fly  1933 EPF-------------NQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVD 1984
            :||             ..::..:.|:|:.||     ..:...|||:||:.|||:..||| .||:|
Zfish   612 DPFYARMEDKYGRFGVKIEWLFIHRILNHSV-----DKKNNVHYLIKWRDLPYDQSTWE-SEDMD 670

  Fly  1985 NDKIEQY-------------------LRFNKIPQRSEWKSKKRPHPELWKKLEKTPVY--KGGNS 2028
            ....|.|                   .:..|:..|...:....|..:...|.::.|.|  ..|.:
Zfish   671 VPDFETYKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQPDYLDSTGGT 735

  Fly  2029 LRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYG-IRGPFLVIAPLSTIPNW 2092
            |.||||||||||:|||....:.|||||||||||:|:..|::|:|:.| .:|||||.||||||.||
Zfish   736 LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINW 800

  Fly  2093 QREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYK-------TESGKVLKE-PIKFNVLITTFEMI 2148
            :||||.|. ||.||.|.|...|:.:|::.|:.::       .::.|:.|| .:||:||:|::|:|
Zfish   801 EREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKEAAVKFHVLLTSYELI 865

  Fly  2149 VTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLE 2213
            ..|...|.:.:|...|:||||||||...|....|....|:|::||:|||||||:.|||.|||||.
Zfish   866 TIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLT 930

  Fly  2214 PSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKY 2278
            |.:|::.|.|:.||..:..|:::.||..:|.|.||||||.||.|.:..|.|.|:.|||:.:||||
Zfish   931 PERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKY 995

  Fly  2279 YRGILEQNFSFLK-KGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYY 2342
            |:.||.:||..|. :|  ..|..:|:|.:|:|:|||.||||...|        .::..:.|...|
Zfish   996 YKYILTRNFEALNTRG--GGNQVSLLNVVMDLKKCCNHPYLFPTA--------ATEAPKMPNGMY 1050

  Fly  2343 KN--LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLR 2405
            ..  |..::||::|:.|:|.|||..||||||||||.:.||:|||:|....|.:|||||.:.|.:|
Zfish  1051 DGSALTKASGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMR 1115

  Fly  2406 QEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVK 2470
            ||||||::.||:.:|||||.|:||||||||..|||||||||||||.||:||.:|.|||||.|.|.
Zfish  1116 QEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM 1180

  Fly  2471 IYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDD 2535
            |||.:.:.:.|..:...|..|:.|...|::.  ..|||.|:   :||:|::|:||.|......|:
Zfish  1181 IYRFVTKASVEERITQVAKKKMMLTHLVVRP--GLGSKAGS---MSKQELDDILKFGTEQLFKDE 1240

  Fly  2536 DNAGDKFCEED----------IDSILKRR------TQVITMESEKGSTFSKASFAASGNRSDITI 2584
            ...||. .|||          ||.:|.|.      |::.:| :|..|:|..|.:         .:
Zfish  1241 LGEGDN-KEEDSSVIHYDDKAIDRLLDRNQDATEDTELQSM-NEYLSSFKVAQY---------VV 1294

  Fly  2585 DDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGG 2649
            .|.|     .::.|:|.:..:::|:.|     |....::.|:.:         |...|:.....|
Zfish  1295 KDED-----EEEEDVDREIIKQEESVD-----PDYWEKLLRHHY---------EQQQEDLARHLG 1340

  Fly  2650 IGLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRW 2714
            .|.|.|:.....|.::|.:|:                                            
Zfish  1341 KGKRPRKPVNYNDCSQEDRGS-------------------------------------------- 1361

  Fly  2715 SELLELGQFKRGWRDVDVEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGL 2779
                     :|.|:|...::.:.    |.:...:|||       |....:|....::.||  .||
Zfish  1362 ---------RRDWQDDQSDNQSD----YSVASEEGDE-------DFDERSEAANSRRPSR--KGL 1404

  Fly  2780 HN-----LVP-RGRNGGKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSALDGSDKDSGGINASA 2838
            .|     |.| ..|.||  |.|..|.:.....:...:......|...:.......:|..|.:...
Zfish  1405 RNDKDKPLPPLLARVGG--NIEVLGFNARQRKAFLNAVMRYGMPPQDAFTTQWLVRDLRGKSEKE 1467

  Fly  2839 VAAAVTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYIQHEVIGDFVQQIKD 2903
            ..|.|:..  ..|..:.....|:.:.:|..::.|.|  ..||.|:.::..|:.:     ||:.  
Zfish  1468 FKAYVSLF--MRHLCEPGADGAETFADGVPREGLSR--QHVLTRIGVMSLIRKK-----VQEF-- 1521

  Fly  2904 NTPISELPIRPPPTPDQVPSSW---WNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAG 2965
                           :.|...|   |..                |:....||          .|.
Zfish  1522 ---------------EHVNGQWSMPWMK----------------ELEESKRA----------AAI 1545

  Fly  2966 AAGDDLAVTS----------LPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTGGDNKDSLLD 3020
            |||:|....|          .|..||  .||.:|..|:::    .|:.....::.|...:|.:: 
Zfish  1546 AAGEDPKTPSTGTPADTQPNTPAPED--LSKTEDIKELEE----KTEGDGEKEVKGSRQEDEII- 1603

  Fly  3021 PERPSSSGKSSSENASGGNDKTESENDATTVSE-SSYKSEVLPGKGSDLDVSVAQQDALSATPEL 3084
             |.|....||.|  ::...:||:.|::|::..: .|.::|    |..:.:.|...::.:|     
Zfish  1604 -EIPDEGEKSPS--SAKKEEKTDKESEASSEKDGGSRENE----KDGEKEKSAESKENMS----- 1656

  Fly  3085 ANTSDPKMNKNDA----------QVSASVSCDPADSSSPEAAGKAQGTGVQTGDAGELDIESEKK 3139
               ||.|.:.:||          :.|:....|.:.:|..:...|.:..||:..|       |.|.
Zfish  1657 ---SDVKADGSDATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPED-------SAKL 1711

  Fly  3140 DNEKETKESTGDAPAVEAKKDSAAIAR-----AEGDKTE--SCTNNATTNISTTTTTTTI----- 3192
            .|.:..||::|....|..:|..|...|     |:|..||  |...|.....:.|..|..|     
Zfish  1712 QNGENAKETSGGGDGVSEEKKKAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRH 1776

  Fly  3193 -------------TNTTTTTNNPS----------------------------------------- 3203
                         .......|:|.                                         
Zfish  1777 DYWLLAGIIFHGYARWQDVQNDPRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQ 1841

  Fly  3204 -SKAANSNNTTD--H---------------ANSNSHLGLDEEESVAGSYPPTVAAVEDATTMWPS 3250
             .:||..|.|.|  |               |.|:.||   .:||::|:.|               
Zfish  1842 LRRAAYLNMTEDPSHPSMALNTRFSEVECLAESHQHL---SKESMSGNKP--------------- 1888

  Fly  3251 MQDLNTRLRRVITAYQRNYKKEELKLQQKA---KLQALVSSTPPLSVPTTPTLQSMQMQLQSGSG 3312
               .|..|.:|:.      :.|||....||   :|.|.::..||::|    .||..:..:.|...
Zfish  1889 ---ANAVLHKVLK------QLEELLSDMKADVTRLPATIARIPPVAV----RLQMSERSILSRLA 1940

  Fly  3313 SGG 3315
            |.|
Zfish  1941 SRG 1943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 BASP1 1554..1786 CDD:283191 52/255 (20%)
HepA 1676..2527 CDD:223627 346/975 (35%)
SDA1 <1693..>1854 CDD:283052 36/219 (16%)
CHROMO <1879..1919 CDD:237991 15/40 (38%)
Chromo 1941..1996 CDD:278797 20/73 (27%)
DEXDc 2048..2197 CDD:238005 72/158 (46%)
Helicase_C 2350..2464 CDD:278689 74/113 (65%)
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
chd4bXP_021322613.1 CHDNT 155..210 CDD:311840 15/62 (24%)
PHD1_CHD_II 377..419 CDD:277006 7/45 (16%)
PHD2_CHD_II 459..501 CDD:277007 0/41 (0%)
CHROMO <546..585 CDD:237991 15/41 (37%)
CHROMO 634..686 CDD:214605 20/57 (35%)
SNF2_N 734..>1274 CDD:331286 261/555 (47%)
DUF1087 1308..1358 CDD:310812 11/63 (17%)
DUF1086 1397..1531 CDD:310809 31/163 (19%)
Neuromodulin_N <1534..>1738 CDD:331332 54/258 (21%)
CHDCT2 1769..1939 CDD:311841 33/200 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D54215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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