DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and smarcal1

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_073768103.1 Gene:smarcal1 / 560412 ZFINID:ZDB-GENE-041210-303 Length:810 Species:Danio rerio


Alignment Length:702 Identity:165/702 - (23%)
Similarity:273/702 - (38%) Gaps:179/702 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1894 CE-WRTEEELLKGDRRVAAKIRRFQQK---QSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDE 1954
            |: |:.....:|| :.|.....|.:..   |:..:.||:.:..:.:           ||...   
Zfish   228 CQGWQKPGATIKG-KCVLVSRSRLEVDIGYQADVIGIFKQMPSKSY-----------DMKTR--- 277

  Fly  1955 TSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELW---KK 2016
                       ||        |:.||   |..|:...|  |::|   ..:::..||..|.   .:
Zfish   278 -----------KW--------TFLLE---DYGKLMADL--NELP---TVETEPLPHAVLQSFSSQ 315

  Fly  2017 LEKT----PVYKGGN----------SLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTF 2067
            .|||    ||....:          ||.|:|.:|:|   |:.......:|||:||||||:|::..
Zfish   316 FEKTESRAPVPPEADLSHIDPQLTRSLMPFQRDGVN---FAVSREGRLLLADDMGLGKTVQAICI 377

  Fly  2068 VHSVYEYGIRGPFLVIAPLSTIPNWQREFEGW------TDMNVVVYHGSVTSKQMIQ--DYEYYY 2124
              :.| |....|.||:||.|....|...|..|      ..:||||.........:|.  .|:...
Zfish   378 --AAY-YRSEWPLLVVAPSSVRFTWAEAFRRWLPSVKPDSINVVVKGKDNLRSGLINIISYDLLN 439

  Fly  2125 KTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKN-RNCKLLEGLRQLN 2186
            |.:     |:|  ..|||:|                      :||:|.||| :..:....|..|.
Zfish   440 KMD-----KQPPSSPFNVII----------------------MDESHFLKNMKTARCRAALPLLK 477

  Fly  2187 LEHRV-LLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLR---------TEEEVNKLQA 2241
            ...|| ||||||..:..:||::.:..:.|:.|....:|.:.:...:         :...:.:|:.
Zfish   478 TAKRVILLSGTPAMSRPAELYTQIQAVRPALFPRFHDFGTRYCDAKQLPWGWDYSSSSNLTELKL 542

  Fly  2242 LL-KPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNT 2305
            || :.:||||||.:|...|..|:..::.|....|..:                |.:|        
Zfish   543 LLEESLMLRRLKSEVLSQLPAKQRKVVTVTTDGINSR----------------TKAA-------- 583

  Fly  2306 MMELRKCCIHPYLLNGAEEQIQ--YDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHR 2368
                         ||.|..::.  |..|||..|....:: |....|....:::.:...|:....:
Zfish   584 -------------LNAAARELAKGYHNKSQEKEALLVFF-NHTAEAKIRAIMEYISDMLECGREK 634

  Fly  2369 VLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGI 2433
            .|:|:.....||.:...|..:...|.||||......||...:|: :......|.:|...|..:|:
Zfish   635 FLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERF-QASQQSCVAVLSITAANMGL 698

  Fly  2434 NLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLG-LDKA 2497
            .|.:|..|:..:..|||...:||:.|.|||||...|.|:.|:.:.|.:..::.....|:. |::.
Zfish   699 TLHSAALVVFAELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTADDYLWPMIQAKMNVLEQV 763

  Fly  2498 VLQSMNTQGSKDG------NNKQLSKKEI-------EDLLKKGAYGAVMDDD 2536
            .|...|...:.:.      :.:||:..|:       :::|      |:||.|
Zfish   764 GLSESNISENAESASFHSRDRQQLTITEMFQRSFDEDEML------ALMDQD 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 7/32 (22%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 6/24 (25%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 10/57 (18%)
PLN03142 2029..>2606 CDD:215601 135/546 (25%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
smarcal1XP_073768103.1 None
Blue background indicates that the domain is not in the aligned region.

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