DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and rad54l

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_957438.1 Gene:rad54l / 394119 ZFINID:ZDB-GENE-040426-968 Length:738 Species:Danio rerio


Alignment Length:706 Identity:197/706 - (27%)
Similarity:312/706 - (44%) Gaps:135/706 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1850 KEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKYRN-FSYLHCEWRTEEELLKGDRRVAAKI 1913
            |:|.:|   :::|..|.|||  |:......|:|...||. .:.|     |...:........|.|
Zfish    14 KQGPDS---DDEEDWEPDME--PQSKRDCREKYISPYRKPLTPL-----TNRPVCADGNEHEAFI 68

  Fly  1914 RRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSL--PYEDCT 1976
            |:...|              ||.........||.:.......:|..        |:|  |:||..
Zfish    69 RKILSK--------------PFKIPIPNYTGVLGLRALGLRRAGVR--------KALHDPFEDGA 111

  Fly  1977 WELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKG-----GNSLRPYQLEG 2036
            ..|.|.               |..|       .|..:....||.||:..     ...|||:|.||
Zfish   112 LVLYEP---------------PAIS-------AHDLIKADKEKLPVHVVVDPVLSKVLRPHQREG 154

  Fly  2037 LNWLKFSW--------YNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGP--------FLVIAP 2085
               :||.|        .|::.||:|||||||||:|.:|.:.::.:   :.|        .:|::|
Zfish   155 ---VKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLK---QSPDCKPEIDKVIVVSP 213

  Fly  2086 LSTIPNWQREFEGWTDMNV--VVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMI 2148
            .|.:.||..|...|....|  |...|.  ||..|......:.::.|..:..||    ||.::|..
Zfish   214 SSLVRNWYNEVGKWLGGRVQPVAIDGG--SKDEIDSKLVNFISQQGMRIPTPI----LIISYETF 272

  Fly  2149 VTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLE 2213
            ......|......|.:.||.|||||.:.:....|..:|.:.|||:||||:||::.|.|||::|:.
Zfish   273 RLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVN 337

  Fly  2214 PSQFSSQEEFMSEF---------------GSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKE 2263
            .....:.:||...|               .....|:::.:|.:::...::||..|.:.|.|..|.
Zfish   338 SGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRTSDILSKYLPVKI 402

  Fly  2264 ETIIEVELTNIQKKYYRGILEQ--NFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQI 2326
            |.::...||.:||:.|:..|:|  ....|:.|..|.   :.::::..|:|.|.||.|:       
Zfish   403 EQVVCCNLTPLQKELYKLFLKQAKPVESLQTGKISV---SSLSSITSLKKLCNHPALI------- 457

  Fly  2327 QYDFKSQHGED---------PESYYKNLI---LSAGKMVLIDKLLPKLK-ANGHRVLIFSQMVRC 2378
             |: |...||:         |::|....:   || |||:::|.:|...: ....:|::.|...:.
Zfish   458 -YE-KCLTGEEGFDGALDLFPQNYSTKAVEPQLS-GKMLVLDYILAMTRTTTSDKVVLVSNYTQT 519

  Fly  2379 LDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVII 2443
            ||:.|.....|:|.:.|:||.:....|.:.::|::.|.|..|:|:|.:||||.|:||..|:.:::
Zfish   520 LDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVM 584

  Fly  2444 YDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVL 2499
            :|.||||.||.||.||..|.||:|...|||||...|.|.::..:.:.|..|...|:
Zfish   585 FDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVV 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 19/73 (26%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 17/67 (25%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 10/59 (17%)
PLN03142 2029..>2606 CDD:215601 159/519 (31%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
rad54lNP_957438.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 8/21 (38%)
HepA 16..641 CDD:440319 196/704 (28%)
DEXHc_RAD54A 147..389 CDD:350825 73/253 (29%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 290..293 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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