DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and Chd2

DIOPT Version :9

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_038968738.1 Gene:Chd2 / 308738 RGDID:1310056 Length:1840 Species:Rattus norvegicus


Alignment Length:1857 Identity:499/1857 - (26%)
Similarity:788/1857 - (42%) Gaps:491/1857 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1545 SLLVASPVKKDKKPSANASNSNAGSDVEK---TEPQSGAEGDAAQEVGEEKSNLPLDESSQLEAS 1606
            |.|.....|.....|..||.|::||..|.   ::|.||.        |.|.::  ..|||:.::.
  Rat    24 SQLTFEEEKLSHSASEEASASDSGSQSESEQGSDPGSGH--------GSESNS--SSESSESQSE 78

  Fly  1607 SSTSAVAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPK--EKA 1669
            |.:.:...|.:.:..:|     ..||                      ..|:|.|.|..|  |:.
  Rat    79 SESESAGSKSQPVLPEA-----KEKP----------------------ASKKERIADVKKMWEEY 116

  Fly  1670 P-------------EPKQ---DEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAM 1718
            |             ||.:   .||.|...|:.:.|..|..:.|.:.:.|:|.::.::        
  Rat   117 PDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDDQ-------- 173

  Fly  1719 EVDSKEESEPDDSKKSDEDNKDKDKMEVDDE-VGKSDKESKPEEQSETVKTEENSKAIEEDKSST 1782
            |..|..|||.       |..|.|.:..:... |.|...:.:|:.|....|.:|:|...::|    
  Rat   174 EQGSSAESEA-------EQKKVKARRPIPRRTVPKPQVKKQPKIQRGKRKKQESSDDDDDD---- 227

  Fly  1783 VLTADHAKEPET-------VLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESL 1840
                |.|.:.:|       |..|.:.|.:.:.|.......||.||:            :.|.|::
  Rat   228 ----DEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGVDEQ------------QDNSETI 276

  Fly  1841 EIEGEKERVKEGEE-------SVKKENDEKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRT 1898
            |...:....|:|..       :|:...|...:.|.|.:...:     :|.:|::.:||:|..|.:
  Rat   277 EKVLDSRLGKKGATGASTTVYAVEANGDPSGDFDTEREEGEI-----QYLIKWKGWSYIHSTWES 336

  Fly  1899 EEELLKGDRRVAAKIRRFQQKQS--------------QQLNIFENIEDEPFNQDFTEVDRVL--- 1946
            ||.|.:...:...|:..|::|:.              :..|..:.:..| .|:.:..|:||:   
  Rat   337 EESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQQELASE-LNKQYQIVERVIAVK 400

  Fly  1947 ---------DMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQ-----YLRFNK- 1996
                     |...|:.:.:......||.||..|||.:|:|| :|.:...|.:.     :.|.|. 
  Rat   401 TSKSALGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWE-DEALIGKKFQSCIDSFHSRNNSK 464

  Fly  1997 -IPQRSEWKSKKRPHPELWKKLEKTPVYKGGNS--LRPYQLEGLNWLKFSWYNTHNCILADEMGL 2058
             ||.|.....|:||.   :..|:|.|.|.||.:  ||.|||||||||..||..:::.||||||||
  Rat   465 TIPTRECKALKQRPR---FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGL 526

  Fly  2059 GKTIQSLTFV-HSVYEYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYE 2121
            |||||:::|: :..:::.:.||||::.||||:.:||||||.|. ::|||||.|.:.|:..|::||
  Rat   527 GKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYE 591

  Fly  2122 YYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLN 2186
            :.:..      .:.:|||.||||:|:::.|...|.:.||....:||||||||.:..|.:.|....
  Rat   592 WIHSQ------TKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFK 650

  Fly  2187 LEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRL 2251
            ..||:|::||||||::.||:|||:|:.|.:|...|:|..:.|..| |.....|..:|:|.:|||:
  Rat   651 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGR-ENGYQSLHKVLEPFLLRRV 714

  Fly  2252 KDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHP 2316
            |.||||||..|.|.|:.||::.:||:||:.||.:|:..|.|||..:. ...:|.:|||:|||.|.
  Rat   715 KKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGST-SGFLNIVMELKKCCNHC 778

  Fly  2317 YLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDI 2381
            ||:...|     |.:.:.|::   ..::||.|:||::|:||||.:|:..|:||||||||||.|||
  Rat   779 YLIRAPE-----DSERETGQE---VLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDI 835

  Fly  2382 LEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDS 2446
            |.:||..:.|||:|:||.|:|.:|::|:|.::..||:.|.|||.|:||||||||.:||||:|:||
  Rat   836 LAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS 900

  Fly  2447 DWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG----- 2506
            |||||||||||||.|||||:|.|.||||:.:.|.|.|:.::|..|:.||..|:|.|:|.|     
  Rat   901 DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLE 965

  Fly  2507 --SKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILK----RRTQVITMES-EK 2564
              |...|:...:|:|:..:||.||.....:.:....:..|.|||.||:    |..:|.|..: |.
  Rat   966 NNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSTSATDEL 1030

  Fly  2565 GSTFSKASFAASGNRSDITIDDPDFW-----TKWAKKVDIDPDACERDETEDLVLSEPRRRTQIK 2624
            .|.|..|:||...:..::.......|     .:..|||:.:    ||.:..:.:...||.|:..|
  Rat  1031 LSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEE----ERQKELEEIYMLPRIRSSTK 1091

  Fly  2625 RYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKK---GNDEYIPRERDALAALGL 2686
            :           .::::.:||.|.       :|:.:|..|.|.:   .:|:..|:.|....:   
  Rat  1092 K-----------AQTNDSDSDTES-------KRQAQRSSASESETDDSDDDKKPKRRGRPRS--- 1135

  Fly  2687 EEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDVDVEDCARIILLYCLQVYKGDE 2751
                           |.|.|:                 .|:.|.::.   |.|..|        :
  Rat  1136 ---------------VRKDLV-----------------EGFTDAEIR---RFIKAY--------K 1157

  Fly  2752 KIKTFIWDLITPTEDGE-VQKISRDHSGLHNLVPRGRNGGKSNKESTGVSTPAPGSASGSNSGNT 2815
            |....:..|.....|.| |.|...|...|..||...........|.......:.|...|...|.|
  Rat  1158 KFGLPLERLECIARDAELVDKSVADLKRLGELVHNSCVSAMQEYEEQLKENASEGKGPGKRRGPT 1222

  Fly  2816 TPAHKSSALDGSDKDSGGINASAVAAAVTSI--HD----------PNHWSKKEKYDADAYLEGAY 2868
                              |..|.|...|.||  |:          |....:|:||          
  Rat  1223 ------------------IKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKY---------- 1259

  Fly  2869 KKHLGRHANKVLLRVRMLYYIQHEVIGDFVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCDK 2933
                     .:..||:..::       |....::|                            |.
  Rat  1260 ---------CLTCRVKAAHF-------DVEWGVED----------------------------DS 1280

  Fly  2934 SLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDE------ 2992
            .||:|.|:||...:..::.||.|.....:             ||:..|    |...|.:      
  Rat  1281 RLLLGIYEHGYGNWELIKTDPELKLTDKI-------------LPVETD----KKPQGKQLQTRVD 1328

  Fly  2993 ---------VDDDGTTTTKDSDSTKLTGGDNKDSLLDPERPSSSGKSSSENASGGNDKTESENDA 3048
                     ::..||.|:            .:::.|...:|                :.:.||.|
  Rat  1329 YLLKLLRKGLEKKGTVTS------------GEEAKLKKRKP----------------RVKKENKA 1365

  Fly  3049 TTVSESSYKSEVLPGKGSDLDVSVAQQDALSATPELANTSDPKMNKNDAQVSASVSCDPADSSSP 3113
            ..:.:.           ..|::|                                  .|..|.:|
  Rat  1366 PRLKDE-----------HGLELS----------------------------------SPRHSDNP 1385

  Fly  3114 EAAGKAQGTGVQTGDAGELDIESEKKDNEKETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNN 3178
            ...|:.:..|::..       .::||..:||.||:. :.| |.::||      .||||.:..:.:
  Rat  1386 SEEGEVKDDGLEKS-------PTKKKQKKKENKENK-EKP-VSSRKD------REGDKEKKKSKD 1435

  Fly  3179 ATTNISTTTTTTTITNTTTTTNNPSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVED 3243
            ....:                   ....|.|::.:..:....|:       .|||.|..:...||
  Rat  1436 KKEKV-------------------KGGDAKSSSKSKRSQGPVHI-------TAGSEPVPIGEDED 1474

  Fly  3244 ATTMWPSMQDLNTRLRRVITAYQRNYKKEE-LKLQQK 3279
            ......:......|:|.|..|.::..|.:: |.:|::
  Rat  1475 DDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQ 1511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 BASP1 1554..1786 CDD:283191 54/253 (21%)
HepA 1676..2527 CDD:223627 332/909 (37%)
SDA1 <1693..>1854 CDD:283052 35/168 (21%)
CHROMO <1879..1919 CDD:237991 11/39 (28%)
Chromo 1941..1996 CDD:278797 18/71 (25%)
DEXDc 2048..2197 CDD:238005 65/150 (43%)
Helicase_C 2350..2464 CDD:278689 73/113 (65%)
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
Chd2XP_038968738.1 CD1_tandem_CHD1-2_like 272..356 CDD:349313 20/88 (23%)
CD2_tandem_CHD1-2_like 389..460 CDD:349308 17/71 (24%)
DEXHc_CHD2 477..713 CDD:350812 108/245 (44%)
PLN03142 481..>1034 CDD:215601 260/568 (46%)
CDH1_2_SANT_HL1 1143..1231 CDD:408175 23/116 (20%)
DUF4208 1484..1566 CDD:404744 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0384
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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