DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and Smarca5

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001424549.1 Gene:Smarca5 / 307766 RGDID:1308832 Length:1072 Species:Rattus norvegicus


Alignment Length:983 Identity:321/983 - (32%)
Similarity:468/983 - (47%) Gaps:216/983 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1940 TEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYL-----RFNKIPQ 1999
            ||::.|.|     |.:.|        |.|.:...|.|:|.:...|.....:||     .|....|
  Rat    55 TEMEEVFD-----DGSPG--------KQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQ 106

  Fly  2000 RSEWKSKKRP------HPELWK-------------------------------------KLEKTP 2021
            .:..|:...|      .|.:.|                                     :.|.:|
  Rat   107 PAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSP 171

  Fly  2022 VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEY-GIRGPFLVIAP 2085
            .|.....||.||:.|||||...:.|..|.|||||||||||:|:::.:..:..| .|.||.:|:.|
  Rat   172 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 236

  Fly  2086 LSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKE---PIKFNVLITTFEM 2147
            .||:.||..||:.|..        ::.|..:|.|     |.:....:::   |.:::|.:|::||
  Rat   237 KSTLHNWMSEFKRWVP--------TLRSVCLIGD-----KEQRAAFVRDVLLPGEWDVCVTSYEM 288

  Fly  2148 IVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFL 2212
            ::.:....|.||||..|||||||:||...||.|.:|:....:|:||:|||||||:.||:||||||
  Rat   289 LIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFL 353

  Fly  2213 EPSQFSSQEEFMSEFGS---LRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNI 2274
            .|..|:|.::|.|.|.:   |..::.|.:|..:|:|.:|||:|.||||||.||:|..|.|.|:.:
  Rat   354 LPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM 418

  Fly  2275 QKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPE 2339
            |:::|..||.::...|........: .|:|.:|:|||||.||||.:|||.           ..|.
  Rat   419 QREWYTRILMKDIDILNSAGKMDKM-RLLNILMQLRKCCNHPYLFDGAEP-----------GPPY 471

  Fly  2340 SYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNL 2404
            :...:|:.::||||::||||||||..|.||||||||.|.|||||||.::|.|.:.|:||:...:.
  Rat   472 TTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDE 536

  Fly  2405 RQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMV 2469
            ||::|:.|::|.|.:|||:|.|:||||||||..||.||:||||||||.||||..|.|||||.|.|
  Rat   537 RQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV 601

  Fly  2470 KIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGS-KDGNNKQLSKKEIEDLLKKGAYGAVM 2533
            :::|.:..||.|..:.::|.|||.||..|:|    ||. .|.|..::.|.|:..:::.||.....
  Rat   602 RVFRFITDNTVEERIVERAEMKLRLDSIVIQ----QGRLVDQNLNKIGKDEMLQMIRHGATHVFA 662

  Fly  2534 DDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKAS---FAASGNRSDITIDDPDF------ 2589
            ..::   :..:||||.||:|..:.....:||.|...::|   |......|....:..|:      
  Rat   663 SKES---EITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKI 724

  Fly  2590 -WTKWAKKVDIDPDACERDET--------EDLVLSEPRR----------RTQIKRYGHEDVMEL- 2634
             :|:|     |:|...||...        |.|.:|||:.          ..|..::....:.|| 
  Rat   725 AFTEW-----IEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELL 784

  Fly  2635 ----------------------NSEESSNENS---DEEGGIGLRSRRRKE-----------KRD- 2662
                                  |:.::..|..   ||.|.:.......||           ||| 
  Rat   785 EKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDEELEEKEKLLTQGFTNWNKRDF 849

  Fly  2663 ----RAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQF 2723
                :|.||.|.|:.....|:.......|.|:|     |..|          |.|.:||      
  Rat   850 NQFIKANEKWGRDDIENIAREVEGKTPEEVIEY-----SAVF----------WERCNEL------ 893

  Fly  2724 KRGWRDVDVEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNL-VPRGR 2787
                     :|..:|:    .|:.:|:.:|:..|  .|....|   .||.|..:..|.| :..|.
  Rat   894 ---------QDIEKIM----AQIERGEARIQRRI--SIKKALD---TKIGRYKAPFHQLRISYGT 940

  Fly  2788 NGGKSNKE 2795
            |.||:..|
  Rat   941 NKGKNYTE 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 14/59 (24%)
PLN03142 2029..>2606 CDD:215601 245/594 (41%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Smarca5NP_001424549.1 None
Blue background indicates that the domain is not in the aligned region.

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