DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and Chd3

DIOPT Version :9

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_038943541.1 Gene:Chd3 / 303241 RGDID:1311923 Length:2120 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 BASP1 1554..1786 CDD:283191
HepA 1676..2527 CDD:223627
SDA1 <1693..>1854 CDD:283052
CHROMO <1879..1919 CDD:237991
Chromo 1941..1996 CDD:278797
DEXDc 2048..2197 CDD:238005
Helicase_C 2350..2464 CDD:278689
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
Chd3XP_038943541.1 CHDNT 203..256 CDD:400425
TNG2 <384..488 CDD:227367
PHD1_CHD_II 443..485 CDD:277006
PHD2_CHD_II 519..561 CDD:277007
CD1_tandem_CHD3-4_like 566..644 CDD:349314
CD2_tandem_CHD3-4_like 689..743 CDD:349309
PLN03142 780..>1334 CDD:215601
DEXHc_CHD3 797..1028 CDD:350813
DUF1087 <1375..1418 CDD:399459
DUF1086 1439..1578 CDD:368921
PHA03169 <1570..>1761 CDD:223003
CHDCT2 1799..1925 CDD:400426
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D54215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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