DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and Hltf

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001426368.1 Gene:Hltf / 295568 RGDID:1309031 Length:1018 Species:Rattus norvegicus


Alignment Length:959 Identity:200/959 - (20%)
Similarity:346/959 - (36%) Gaps:305/959 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1776 EEDKSSTVLTADHAKE--------PETVLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEAT 1832
            :|:....||  ||.|:        |:||             .|::....||.......|.|....
  Rat   153 KEENREVVL--DHLKKHGFKLGPTPKTV-------------GSSLENTWGSGRAGPSYSRPVHVA 202

  Fly  1833 TEKNKESLEIEGEK--ERVKEGEESVKKENDEKTEADM--------------ENKPE-PVFIDVE 1880
            .:...|.|:.|.:|  |.:||.:.:::.|..|..|..:              ||..| |.|.::.
  Rat   203 VQMTTEQLKTEFDKLFEDLKEDDRTIEMEPAEAVETPLLPHQKQALAWMIARENSKELPPFWELR 267

  Fly  1881 E--YFVKYRNFSYLHCEWRTEEELLKGD-------RRVAAKIRRFQQ---------KQSQQLNIF 1927
            .  |:....|||...........:|..|       ..:|..:..|..         |:|.....:
  Rat   268 NDLYYNTITNFSVKERPENVHGGILADDMGLGKTLTAIAVILTNFDDGRPLLGKRGKESHPGKEY 332

  Fly  1928 EN----------------------IEDEPFNQDFTEVDRVLDM----------SVHTDETSGETT 1960
            ::                      ..:||...|.:|...|.|:          ||.:.|:|.   
  Rat   333 KDETVKLRGSNTNKTTDGHSEPSACSEEPSISDVSEKSNVSDLFSFFSKRRKISVQSTESSE--- 394

  Fly  1961 KHYLVKWKSLPYEDCTWELEEDVDNDKIEQ----YLRFNKIPQRSEWKSKKRPHPELWKKLEKTP 2021
                               .|:::..|:.|    .|:..::..:|:.|...:...:....|..| 
  Rat   395 -------------------SEEIETSKLSQKMKGKLKNTQLDTKSKVKGSSKIKEDTQFALALT- 439

  Fly  2022 VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPL 2086
             |.|..:.:....:|.:.::.|          .:...|:..::.               |:|.||
  Rat   440 -YFGPATKKKMLKKGTSVMESS----------KKCDTGERTRTT---------------LIICPL 478

  Fly  2087 STIPNW-------QREFEGWT------------DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVL 2132
            |.:.||       .|.|..:|            |:|:.||:|    ...|:|..:..|.:     
  Rat   479 SVLSNWILFSLISLRFFMKYTQDQIGQHIKSEVDLNLYVYYG----PDRIRDSTWLSKQD----- 534

  Fly  2133 KEPIKFNVLITTFEMIVTDY-----MDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVL 2192
                   :::||:.::..||     ..|.:..|...::||.|.::|.|.:..:.:.:|..|.|.:
  Rat   535 -------IILTTYNILTHDYGTKDNSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWV 592

  Fly  2193 LSGTPLQNNISELFSLLNFLEPSQFSSQEEF---------MSEFGSLRTEEEVNKLQALLKPMML 2248
            |:|||:||::.:|:|||:||:...|:.:|.:         ..:.|.||      :||:|:|.:.|
  Rat   593 LTGTPIQNSLKDLWSLLSFLKLKPFTDREWWHRIIQRPVTTGDEGGLR------RLQSLIKSITL 651

  Fly  2249 RRLKDDVEKSL----APKEETIIE-VELTNIQKKYYRGILEQNFS----FLKKGTTSANIPNLMN 2304
            ||.|....|..    .|:.:..|: :.|:..::|.|:.:..:..:    :..:||..|:..:::.
  Rat   652 RRTKTSKIKGKPVLELPERKVFIQHITLSVEERKIYQSVKNEGKATIARYFTEGTVLAHYADVLG 716

  Fly  2305 TMMELRKCCIHPYL-LNGAEEQIQYDFKSQHGEDPESYYK------NLILSAGK----MVLIDKL 2358
            .::.||:.|.|.:| .||....     .....:.||...|      .||||:|.    .:.:|.|
  Rat   717 LLLRLRQICCHVHLPTNGTSSS-----DPSRSDTPEELRKMLVTKMKLILSSGSDEECSICLDSL 776

  Fly  2359 -----------------------------LPKLKAN--GHRV----------------------- 2369
                                         .|..::|  ||.:                       
  Rat   777 TFPVITHCAHVFCKPCICQVIQREQPHAKCPLCRSNIHGHNLLECPPEELACDSDNKSDMEWTSS 841

  Fly  2370 ----------------------LIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRY 2412
                                  |:.||....|.::|..|....:.|.|:||.:....|.|:|..:
  Rat   842 SKINALMNALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCF 906

  Fly  2413 --SKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLL 2475
              :..||.. :.||..||||:|:||.||..|.:.|..|||..:.|...||||:||::.|.|.:.:
  Rat   907 QNTDAGSPT-IMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFI 970

  Fly  2476 CRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLL 2524
            .:::.|..|....:||..|......:..|...:   .||....||..|:
  Rat   971 VKDSVEENMLKIQNMKRELAAGAFGTKKTDADE---MKQAKINEIRTLI 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 39/189 (21%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 17/90 (19%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 12/71 (17%)
PLN03142 2029..>2606 CDD:215601 141/627 (22%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
HltfNP_001426368.1 None
Blue background indicates that the domain is not in the aligned region.

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