DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and smarca5

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001075098.2 Gene:smarca5 / 282615 ZFINID:ZDB-GENE-021125-1 Length:1035 Species:Danio rerio


Alignment Length:1192 Identity:350/1192 - (29%)
Similarity:526/1192 - (44%) Gaps:328/1192 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1667 EKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDS 1731
            |.:.|.:::||.|:||.|              |.::.|.:::...:...:||:.:::..|.|   
Zfish     5 ESSMEQQREEEPSQLDPA--------------GPAEDDTSENGHDEASDTAMDSEAQSSSPP--- 52

  Fly  1732 KKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVL 1796
                 ..|.||.:            ...||:.:|                     |.....|.:|
Zfish    53 -----SAKGKDLL------------GGYEEKVQT---------------------DRTNRFEYLL 79

  Fly  1797 EKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKEND 1861
            ::.||  .|:..|.|..|...|..|                           :|.|...:||  |
Zfish    80 KQTEV--FAHFIQPAAQKTPTSPLK---------------------------MKPGRPRIKK--D 113

  Fly  1862 EKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNI 1926
            ||                                   :..|..||.|    .||.:|::.::|  
Zfish   114 EK-----------------------------------QNLLSAGDNR----HRRTEQEEDEEL-- 137

  Fly  1927 FENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQY 1991
                                 :|.::..||                 .||               
Zfish   138 ---------------------LSENSKATS-----------------VCT--------------- 149

  Fly  1992 LRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEM 2056
                                    :.:.:|.|.....||.||:.|||||...:.|..|.||||||
Zfish   150 ------------------------RFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEM 190

  Fly  2057 GLGKTIQSLTFVHSVYEY-GIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQMIQDY 2120
            |||||:|:::.:..:..| .|.||.:|:.|.||:.||..||:.|..        |:.:..:|.|.
Zfish   191 GLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVP--------SLKAVCLIGDR 247

  Fly  2121 EYYYKTESGKVLKE---PIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGL 2182
            |     |....:::   |.:::|.:|::||::.:....|.||||..|||||||:||...||.|.:
Zfish   248 E-----ERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIV 307

  Fly  2183 RQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS---LRTEEEVNKLQALLK 2244
            |:....:|:||:|||||||:.||::|||||.|..|:|.|:|.:.|.:   |...:.|.:|..:|:
Zfish   308 REFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLR 372

  Fly  2245 PMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMEL 2309
            |.:|||:|.||||||.||:|..|.|.|:.:|:::|..||.::...|........: .|:|.:|:|
Zfish   373 PFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKM-RLLNVLMQL 436

  Fly  2310 RKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQ 2374
            ||||.||||.:|||.           ..|.:...:|::::||||::||||||||..|.|||||||
Zfish   437 RKCCNHPYLFDGAEP-----------GPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQ 490

  Fly  2375 MVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAAD 2439
            |.|.|||||||.::|.|.:.|:||:.....||.:|:.:::|.|.:|:|:|.|:||||||||..||
Zfish   491 MTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATAD 555

  Fly  2440 TVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2504
            .|||||||||||.||||..|.|||||:|.|:::|.:..||.|..:.::|.|||.||..|:|    
Zfish   556 VVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ---- 616

  Fly  2505 QGS-KDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITME-SEKGST 2567
            ||. .|.:..:|.|.|:..:::.||.......::   :..:||||.||:|..:. ||| .||.:.
Zfish   617 QGRLVDPSMNKLGKDEMLSIIRHGATHVFASKES---EITDEDIDGILERGERK-TMEMKEKMAN 677

  Fly  2568 FSKAS---FAASGNRSDITIDDPDFWTKWAKKVD---IDPDACERDET--------EDLVLSEPR 2618
            ..:.|   |......|....:..|:..|  |||.   |:|...||...        |.|.:|||:
Zfish   678 LGEGSLRNFTMDTENSVYNFEGEDYREK--KKVVTNWIEPPKRERKANYAVDAYFREALRVSEPK 740

  Fly  2619 R----------RTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEY 2673
            .          ..|..::....:.||..:|.......    ||.:..|..:..:.|..:|.....
Zfish   741 APKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKT----IGYKVPRNPDLPNSAEMQKEEQAK 801

  Fly  2674 IPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRG---WRDVDVEDC 2735
            |    |....|..||::           .::.|||.|:..|:: .:..||.:.   |...|:|:.
Zfish   802 I----DEAEPLNEEELE-----------EKENLLSQGFTIWTK-RDFNQFIKANEKWGRDDIENI 850

  Fly  2736 ARIILLYCLQVYKGDEKIKTF---IWD----------LITPTEDGEVQ-------------KISR 2774
            ||.:      ..|..|::..:   .|:          ::...|.||.:             ||.|
Zfish   851 AREV------EGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGR 909

  Fly  2775 DHSGLHNL-VPRGRNGGKSNKE 2795
            ..:..|.| :..|.|.||:..|
Zfish   910 YKAPFHQLRISYGTNKGKNYTE 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 45/255 (18%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 12/66 (18%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 5/57 (9%)
PLN03142 2029..>2606 CDD:215601 248/591 (42%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
smarca5NP_001075098.2 PLN03142 4..1030 CDD:215601 350/1192 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.