DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and CHD5

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_056372.1 Gene:CHD5 / 26038 HGNCID:16816 Length:1954 Species:Homo sapiens


Alignment Length:95 Identity:21/95 - (22%)
Similarity:37/95 - (38%) Gaps:24/95 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ECDTKGLIVEKSFLQSV----HDCTEYLQIPKERLGQYMANEFPPDDETKCLLFCVGVDLGWWNN 81
            :|.|:.:...:..||.:    .:..|.|:..:.|||:::.:           |..:..||   ..
Human   140 KCGTELMQKSQEMLQRLSHLGRENMEKLKASEVRLGEHLRS-----------LQTMITDL---EK 190

  Fly    82 TCGLQVPAIVSYFQPVQGDKQYEKRTKECL 111
            .||....|:      :|..|.|.||.:..|
Human   191 NCGESAVAL------LQNAKCYLKRNESIL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310
PLN03142 2029..>2606 CDD:215601
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
CHD5NP_056372.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134
CHDNT 145..200 CDD:462357 13/74 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..338
Histone-binding 343..653
PHD1_CHD_II 345..387 CDD:277006
PHD2_CHD_II 418..460 CDD:277007
CD1_tandem_CHD3-4_like 465..544 CDD:349314
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..571
CD2_tandem_CHD3-4_like 589..642 CDD:349309
PLN03142 698..>1214 CDD:215601
DEAH box 847..850
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1209..1253
DUF1087 1298..1351 CDD:461922
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1351..1411
CHDII_SANT-like 1389..1529 CDD:461920
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1524..1564
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1597..1640
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1658..1696
CHDCT2 1733..1878 CDD:462358
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.