DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and hrp3

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_001342861.1 Gene:hrp3 / 2543064 PomBaseID:SPAC3G6.01 Length:1388 Species:Schizosaccharomyces pombe


Alignment Length:1654 Identity:465/1654 - (28%)
Similarity:705/1654 - (42%) Gaps:399/1654 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1649 LVLAMRMGKRELILDKPKEKAPEPKQD--EEKSELDEATTDKPEGDEKFKTE--GESKKDLTDSE 1709
            :.||:...|....||..:.:.|..||:  |..|....|:..|.:..|....|  |..:...|.|.
pombe     6 IALALSSSKAIEQLDHVQTETPNLKQEMSESPSNSGVASKRKLQSTEWLDPELYGLRRSGRTRSN 70

  Fly  1710 ETKLESSAMEVDSKEESEPDDSKKSDED----NKDKDKMEVDDEVGKSDKESKPEEQSETVKTEE 1770
            ..:.    ::.|.:|:..|...:|...:    ::.:...::|||             :|:|.:||
pombe    71 PGRY----VDTDDQEDVFPSKHRKGTRNGSSFSRHRTIRDLDDE-------------AESVTSEE 118

  Fly  1771 NSKAIEEDKSS---TVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEAT 1832
            :    |.|.||   |.......|:..|.::    ||.....::  ||....:|.:..:|..||..
pombe   119 S----ESDDSSYGGTPKKRSRQKKSNTYVQ----DEIRFSSRN--SKGVNYNEDAYFESFEEEEE 173

  Fly  1833 TEKNKESLEIEGEKE-----------RVKEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKY 1886
            .|..:.:.|:..|.|           |:.||.:......|                  .|:.:|:
pombe   174 EEMYEYATEVSEEPEDTRAIDVVLDHRLIEGHDGSTPSED------------------YEFLIKW 220

  Fly  1887 RNFSYLHCEWR--TEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFN------------- 1936
            .|||:|||.|.  ....:::|.::|...|:       |.:.:...|.::|..             
pombe   221 VNFSHLHCTWEPYNNISMIRGSKKVDNHIK-------QVILLDREIREDPTTTREDIEAMDIEKE 278

  Fly  1937 ------QDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFN 1995
                  :::.:|||::...:::|     .:..||||||.|.|:.||||....::.....:...|.
pombe   279 RKRENYEEYKQVDRIVAKHLNSD-----GSVEYLVKWKQLLYDFCTWEASSIIEPIAATEIQAFQ 338

  Fly  1996 K------IPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILAD 2054
            :      .|.|.......||.   ::|||:.|.|..|..||.:||.|:||:.:.|:...|.||||
pombe   339 EREESALSPSRGTNYGNSRPK---YRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILAD 400

  Fly  2055 EMGLGKTIQSLTFV----HSVYEYGIRGPFLVIAPLSTIPNWQREFEGW-TDMNVVVYHGSVTSK 2114
            |||||||:|::.|:    ||:.::   |||||:.||||:|.||.....| :|||.:.|.|:.||:
pombe   401 EMGLGKTVQTVAFLSYLAHSLRQH---GPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSR 462

  Fly  2115 QMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLL 2179
            |:|:|||:|...      .:.||||:|:||:|.::.|...|....|:...|||||||||....|.
pombe   463 QVIRDYEFYVDG------TQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLY 521

  Fly  2180 EGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLK 2244
            |.|.|....:|:|::||||||||.||.:|::||.|.:|..:||...|......|..:..||..|:
pombe   522 EALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIREEINLEAPDEEQEAYIRSLQEHLQ 586

  Fly  2245 PMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMEL 2309
            |.:|||||.||||||..|.|.|:.|||:::|..:|:.||.:|:..|.:..:|.:..:|:|.::||
pombe   587 PYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVEL 651

  Fly  2310 RKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQ 2374
            :|...||||.:|.||.......||...|  ...|.||:::|||||:||||.:|:.:|||||||||
pombe   652 KKASNHPYLFDGVEESWMQKINSQGRRD--EVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQ 714

  Fly  2375 MVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAAD 2439
            |||.||||.|||..|.||.:|:||.:...:|:.:||.::.|.|..|||||.|:||||||||..||
pombe   715 MVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTAD 779

  Fly  2440 TVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNT 2504
            ||||:|||||||.||||.||.|||||:..|.:||||.::|.|.::.::|..|:.|:.|::....|
pombe   780 TVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVT 844

  Fly  2505 QGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITME-----SEK 2564
            ...|:..|.:.|.:|:..:||.||......::|. .|..:.::|.||:......|..     |..
pombe   845 DKQKNSKNDKFSAEELSAILKFGASNMFKAENNQ-KKLEDMNLDEILEHAEDHDTSNDVGGASMG 908

  Fly  2565 GSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHE 2629
            |..|.| .|..:..::|::.|            ||.| ..||::.|:    |.|.|.:.:....|
pombe   909 GEEFLK-QFEVTDYKADVSWD------------DIIP-LTEREKFEE----EDRLREEEEALKQE 955

  Fly  2630 DVMELNSEE------SSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEE 2688
              :||:|..      ||...|....|...|..:::..:|....:|           .:..|....
pombe   956 --IELSSRRGNRPYPSSAVESPSYSGTSERKSKKQMLKDEVLLEK-----------EIRLLYRAM 1007

  Fly  2689 IQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWRDVDVEDCARIILLYCLQVYKGDEKI 2753
            |:||:...                |::::::       :.|:..:|.               ..|
pombe  1008 IRYGSLEH----------------RYNDIVK-------YADLTTQDA---------------HVI 1034

  Fly  2754 KTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKESTGVSTPAPGSASGSNSGNTTPA 2818
            |....||:|.:... |....:|.|          |...:||.|                      
pombe  1035 KKIAADLVTASRKA-VSAAEKDLS----------NDQSNNKSS---------------------- 1066

  Fly  2819 HKSSALDGSDKDSGGINASAVAAAVTSIHDPNHWSKKEKYDA--DAYLEGAYKKHLGRHANKVLL 2881
              ..||..:.|....|||..:...:..:            |.  ||.....|...      ::.:
pombe  1067 --RKALLITFKGVKNINAETLVQRLNDL------------DILYDAMPTSGYSNF------QIPM 1111

  Fly  2882 RVRMLYYIQHEVIGDFVQQIKDNTPISELPIRPPPTPDQVPSSW---WNPICCDKSLLVGTYKHG 2943
            .||.::                                    .|   |.| ..|..||.|..|||
pombe  1112 HVRSVH------------------------------------GWSCQWGP-REDSMLLSGICKHG 1139

  Fly  2944 CEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTK 3008
            ...:.::|.||.|                             |..|...::|     ||.:|::.
pombe  1140 FGAWLEIRDDPEL-----------------------------KMKDKIFLED-----TKQTDNSV 1170

  Fly  3009 LTGGDNKDS--------------LLDP--ERPSSSGKSSSENASGGNDKTESENDATTVSESSYK 3057
            ....:||:.              ||..  |...:.|..||. |...|.||:.:.......:|   
pombe  1171 PKDKENKEKKVPSAVHLVRRGEYLLSALREHHQNFGIKSSP-AISTNGKTQPKKQTANRRQS--- 1231

  Fly  3058 SEVLPGKGSDLDVSVAQQ-DALSATPELA--------NTSDPKMNKNDAQVSASVSCDPADSSSP 3113
                 ||.   :|..||: ::.:.||..|        ::.|.|:.....:.|.|.:..|..|.. 
pombe  1232 -----GKP---NVKSAQKIESATRTPSPAISESRKKPSSKDTKIETPSREQSRSQTASPVKSEK- 1287

  Fly  3114 EAAGKAQGTGVQTGDAGELDIESEKKDNEKETKESTGDAPA----VEAKKDSAAIARAEGDK--T 3172
                          |.|.:.:.:|:|...||..     .|.    ...:|||:.:.|||..|  |
pombe  1288 --------------DDGNVSLNAEQKARCKELM-----YPVRKHMKRLRKDSSGLGRAELVKLLT 1333

  Fly  3173 ESCTNNATTNISTTTTTTTITNTTTTTNN 3201
            | |......:|..|...|......|...|
pombe  1334 E-CLTTIGKHIEKTVNDTPSEEKATVRKN 1361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 63/297 (21%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 15/68 (22%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 16/57 (28%)
PLN03142 2029..>2606 CDD:215601 255/586 (44%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
hrp3NP_001342861.1 CD1_tandem_CHD1_yeast_like 189..250 CDD:349312 15/78 (19%)
CD2_tandem 286..339 CDD:349306 17/57 (30%)
PLN03142 339..>895 CDD:215601 254/570 (45%)
Cdh1_DBD_1 997..1081 CDD:408024 23/167 (14%)
DUF4208 1300..1384 CDD:464035 18/68 (26%)
Blue background indicates that the domain is not in the aligned region.

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