DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and rrp1

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_594246.1 Gene:rrp1 / 2542440 PomBaseID:SPAC17A2.12 Length:897 Species:Schizosaccharomyces pombe


Alignment Length:741 Identity:152/741 - (20%)
Similarity:273/741 - (36%) Gaps:240/741 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1971 PYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGG--NSLRPYQ 2033
            |||.   :::.:....::.|.|:.|          ...|...:..:|:...|...|  .||.|:|
pombe   203 PYER---KVQPEHVTKELHQLLQHN----------TPSPFDTIDLQLKNEQVQSAGLLVSLLPHQ 254

  Fly  2034 LEGLNWLKFSWYNTHNC--ILADEMGLGKTIQSLTFVHSVYEYG-IRGPFLVIAPLSTIPNWQRE 2095
            :||..|:: |...:..|  ::||:||||||||::..:.:..... :|...|::..::.:..|..|
pombe   255 VEGHAWME-SMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLIVVSVALLHQWAEE 318

  Fly  2096 FEGWT----DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156
            .....    .::|.::|||  :|:.:..||.             .:::|::||:.|:..:.....
pombe   319 LSTKVHPSKKLSVYIHHGS--TKKNLDSYEL-------------SQYDVVLTTYSMLAYEMKQND 368

  Fly  2157 AFN-------------------WRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNI 2202
            |||                   |...|:||||.::||:....:...:|:.::|..|||||:||:|
pombe   369 AFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHI 433

  Fly  2203 SELFSLLNFLEPSQFSSQEEFMSEFG----SLR---TEEEVNKLQALLKPMMLRRLKD------- 2253
            .|.:|||.||....:.....|..:..    |.|   .|..:.:|:.||...:.||.|:       
pombe   434 DEFYSLLKFLRIKPYCVWSLFAKDISRPLKSYRADIVEAALKRLRILLASTVFRRTKETRVNNLP 498

  Fly  2254 ----------DVEKSLAPKEETIIEVELTNIQK---KYYRGILE-QNFSFLKKGTTSANIPNLMN 2304
                      .|..:|.|:|..:...::::.|.   .|:....: ..:.|            |:.
pombe   499 IVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGF------------LLV 551

  Fly  2305 TMMELRKCCIHPYLLNGA----------------------------------------------- 2322
            :::.||:.|.||:|:..:                                               
pombe   552 SLLRLRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLAP 616

  Fly  2323 ----------------------------------------------------------------- 2322
                                                                             
pombe   617 VFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQAIHGPLNSLKQ 681

  Fly  2323 -------------------EEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHR 2368
                               |.:|...|..:.|:....:..:..|:..:..::|.:..|   ...:
pombe   682 LELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQARQTILDIIGSK---RNEK 743

  Fly  2369 VLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGI 2433
            :|::||..:.|.::...|........|.||.:..|.||:::..::. ..|..|.|:..|||.:|:
pombe   744 ILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNN-DKDVLVMLVSLKAGSVGL 807

  Fly  2434 NLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAV 2498
            |||.|:.||:.:..:||..:.||..|.||:||:|.|.:||.:.::|.|..:......|..|.|..
pombe   808 NLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEA 872

  Fly  2499 LQSMNTQGSKDGNNKQLSKKEIEDLL 2524
            |.|        ..|..||:.:.|:||
pombe   873 LDS--------NENNPLSRLDKEELL 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 5/23 (22%)
PLN03142 2029..>2606 CDD:215601 141/681 (21%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
rrp1NP_594246.1 HepA <244..874 CDD:440319 135/661 (20%)
RING_Ubox 603..663 CDD:473075 0/59 (0%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.