DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and Chd3

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_017169944.1 Gene:Chd3 / 216848 MGIID:1344395 Length:2111 Species:Mus musculus


Alignment Length:2467 Identity:614/2467 - (24%)
Similarity:903/2467 - (36%) Gaps:803/2467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1276 EYSEGMGD-LSQDVHSANELDTSTD-------GSGKKKKPRKPRTPK----DPNKPPRDRTPKAK 1328
            |..|..|| ..::|.:|:|.|...|       |.|..:...:...|.    .|..||....|   
Mouse    22 EEEEEEGDEEEEEVEAADEDDEEEDEEGVLGRGPGHDRSRDRHSPPSCHLFPPPPPPLPPPP--- 83

  Fly  1329 KPKDPNDPNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPKAGSADGEAETTS 1393
             |.|.:|.....:...||||....|::|                 :|||                
Mouse    84 -PPDKDDIRLLPSALGVKKRKRGPKKQK-----------------ENKP---------------- 114

  Fly  1394 GGTGVDGESPDYDDIPVSKIPRGSNEDEKEAEAGDETVDSVPDSAGDPASTPSRRDRKRSTARSR 1458
                  |:            ||...:.:.|.|.|.|                  ||..|..:.| 
Mouse   115 ------GK------------PRKRKKLDSEEEFGSE------------------RDEYREKSES- 142

  Fly  1459 RNANSEEG-GSARKNRGSLSAKALK--KRRNRGRIVPESDGEDDTLDRTPPPSPPPDSEMDSNKR 1520
              ..||.| |..||.|.....|..|  |||.||    |.||....::                 :
Mouse   143 --GGSEYGTGPGRKRRRKHREKKEKKTKRRKRG----EGDGGHKQVE-----------------Q 184

  Fly  1521 RSSRNTQRKKYIDDVMLRFSDDENSLLV--------ASPVKKDKKPSANASNSNAGSDVEKTEPQ 1577
            :||........::||...||:::...|.        ..|:...|.|..               |.
Mouse   185 KSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKI---------------PM 234

  Fly  1578 SGAEGDAAQEVGEEKSNLPLDESSQLEASSSTSAVAEKERQISTDAANAAMSSKPNYVYINTGDE 1642
            |........:..|..:|.|...|:...|:::.:|.|....|:|. |.::|....|:         
Mouse   235 SKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSA-AVSSATPIAPS--------- 289

  Fly  1643 DSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEG-------------DEK 1694
                                ..|....|.|..:.:...:..|.|.:.:|             |.:
Mouse   290 --------------------GPPPALPPPPAPEIQPPPIRRAKTKEGKGPGHKRRNKSPRVPDGR 334

  Fly  1695 FKTEGES------KKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKS 1753
            .|..|:.      |..|...:..|..|.|.:.:...|.|.::|        |.|...|....|..
Mouse   335 KKLRGKKMAPLKIKLGLLGGKRKKAGSCAFQSEEGHEPEAEES--------DLDSGSVHSASGWP 391

  Fly  1754 DKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGS 1818
            |         ..|:.::..:.....|...||..      ..|..:.|||....|.|......:..
Mouse   392 D---------GPVRAKKLKRGRPGRKKKKVLGC------PAVTGEEEVDGYETDHQDYCEVCQQG 441

  Fly  1819 DEKSTDDSNP------------EEATTEK------NKESLEIEG---EKERVKEGEESVKKENDE 1862
            .|....|:.|            :.|...|      .||.::.|.   |:|..:||||..|:|.|:
Mouse   442 GEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEGEKEEEDD 506

  Fly  1863 KTE------------------------------ADMEN--------------------------K 1871
            ..|                              .|:.|                          :
Mouse   507 HMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGE 571

  Fly  1872 PEPVFI----------DV-----------EEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRR 1915
            | ||.:          ||           .|:|||:...||.||.|..|.:|   :.......|.
Mouse   572 P-PVAVPAPQQADGNPDVPPPRPLQGRSEREFFVKWVGLSYWHCSWAKELQL---EIFHLVMYRN 632

  Fly  1916 FQQKQSQQLNIFENIEDEPFNQDF--------TEVDRVLD-------------------MSVH-- 1951
            :|:|         |..|||...|:        ::..:|.|                   |:||  
Mouse   633 YQRK---------NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRI 688

  Fly  1952 -TDETSGETTKHYLVKWKSLPYEDCTWELEE----DVDNDKIEQYLRFNKI------PQRSEWKS 2005
             ......:...|||||||.|||:..|||.:|    :.|:.| :.|.|..::      .|..::|.
Mouse   689 INHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHK-QSYWRHRELIMGEDPAQPRKYKK 752

  Fly  2006 KKR----------PHPELWKKLEKTP--VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGL 2058
            ||:          |..:...|.|..|  :...|.:|..|||||||||:|||....:.||||||||
Mouse   753 KKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGL 817

  Fly  2059 GKTIQSLTFVHSVYEYG-IRGPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYE 2121
            |||||::.|::|:|:.| .:|||||.||||||.||:|||:.|. ...||.|.|...|:.:|::.|
Mouse   818 GKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENE 882

  Fly  2122 YYYKTESGKVLKE--------PIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKL 2178
            :.::..:.|..|:        .:||:||:|::|:|..|...|.:..|...|:||||||||...|.
Mouse   883 FSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKF 947

  Fly  2179 LEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALL 2243
            ...|....::|::||:|||||||:.|||.|||||.|.:|::.|.|:.||..:..|:::.||..||
Mouse   948 FRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLL 1012

  Fly  2244 KPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL-KKGTTSANIPNLMNTMM 2307
            .|.||||||.||.|::..|.|.|:.|||:.:|||||:.||.:||..| .:|  ..|..:|:|.||
Mouse  1013 GPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRG--GGNQVSLLNIMM 1075

  Fly  2308 ELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKN--LILSAGKMVLIDKLLPKLKANGHRVL 2370
            :|:|||.||||...|        ..:..:.|...|:.  ||.|:||::|:.|:|.|||..|||||
Mouse  1076 DLKKCCNHPYLFPVA--------AMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVL 1132

  Fly  2371 IFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINL 2435
            |||||.:.||:|||:|.|..|.:|||||.|.|.||||||||::.||:.:|.|||.|:||||||||
Mouse  1133 IFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1197

  Fly  2436 TAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQ 2500
            ..||||||:||||||.||:||.:|.|||||...|.|||.:.|.:.|..:...|..|:.|...|::
Mouse  1198 ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVR 1262

  Fly  2501 SMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDK---------FCEEDIDSILKRR-- 2554
            .  ..|||.|:   :||:|::|:||.|. ..:..|:|.|:.         :..|.|..:|.|.  
Mouse  1263 P--GLGSKAGS---MSKQELDDILKFGT-EELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD 1321

  Fly  2555 ----TQVITMESEKGSTFSKASFAASGNRSDITID-------------DPDFWTKWAKKVDIDPD 2602
                |.|..| :|..|:|..|.:..   |.:..|:             |||:|.|..:.      
Mouse  1322 ATEDTDVQNM-NEYLSSFKVAQYVV---REEDKIEEIEREIIKQEENVDPDYWEKLLRH------ 1376

  Fly  2603 ACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSE---------ESSNENSDE--EGGIGLRSRR 2656
             ....:.|||..:..:.:...|:..:.|..:.:.:         |..:|:.||  ||       |
Mouse  1377 -HYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEG-------R 1433

  Fly  2657 RKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELG 2721
            |:.||....||   |:.:|   ..||.:|      ||                        :|:.
Mouse  1434 RQSKRQLRNEK---DKPLP---PLLARVG------GN------------------------IEVL 1462

  Fly  2722 QFKRGWRDVDVEDCARIILLYCLQVYKGDEKIKTFI-----WDLITPTEDG-EVQKISRDHSGLH 2780
            .|....|                         |.|:     |.:  |.:|. ..|.:.||..   
Mouse  1463 GFNTRQR-------------------------KAFLNAVMRWGM--PPQDAFTTQWLVRDLR--- 1497

  Fly  2781 NLVPRGRNGGKSNKESTGVST------PAPGSASGSNSGNTTPAHKSSALDGSDKDSGGINASAV 2839
                     ||:.||.....:      ..||:                  |||            
Mouse  1498 ---------GKTEKEFKAYVSLFMRHLCEPGA------------------DGS------------ 1523

  Fly  2840 AAAVTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYI-------QH------ 2891
                                 :.:.:|..::.|.|  .:||.|:.::..:       :|      
Mouse  1524 ---------------------ETFADGVPREGLSR--QQVLTRIGVMSLVKKKVQEFEHINGRWS 1565

  Fly  2892 --EVIGDFVQQIKDNTPISELPIRPPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADP 2954
              |::.|...:.|.::..|......|.||:   :|..|..|..|.                 |.|
Mouse  1566 MPELMPDPSAESKRSSRASSPTKTSPTTPE---ASTTNSPCTSKP-----------------ATP 1610

  Fly  2955 NLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTGG-----DN 3014
                    .....||.:..   |:::||..::.:..::....|.....:.||......     ::
Mouse  1611 --------APSEKGDGVRT---PLDKDDTENQEEKPEKNSKVGEKMEAEVDSPSPAPSLGERLEH 1664

  Fly  3015 KDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKSEVLPGKGSD---LDVSVAQQD 3076
            :..||:.|.|...|::..|....| |:.:|.::.|            ||:..:   |||...::.
Mouse  1665 RKILLEDEAPGVPGETEPEPGYRG-DREKSASEPT------------PGERGEEKPLDVQEHRER 1716

  Fly  3077 ALSATPELANTSDPKMNKNDAQVSASVSCDPADSSSP-----EAAGKAQGTGVQTGDAGELDIES 3136
            ....|.:|...::..  |.|.::...   .|.|...|     |...|.:.. ....|.|..::.:
Mouse  1717 TEGETGDLGKRAEDV--KADRELRLG---PPRDEPRPNGRREEKVEKPRFM-FNIADGGFTELHT 1775

  Fly  3137 EKKDNEKETKESTGDAPAVEAKKDS----AAIARAEGDKTESCTNNATTNISTTTTTTTITNTTT 3197
             ...||:....|:|....:..::..    |.|......:.:...|:|...|              
Mouse  1776 -LWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWQDIQNDAQFAI-------------- 1825

  Fly  3198 TTNNPSSKAANSNNTTDHANS---------------------NSHLGLDEE-------------- 3227
             .|.|....||..|..:..|.                     .::|.|.:|              
Mouse  1826 -INEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNLSQEPAHPAMALHARFAE 1889

  Fly  3228 -------------ESVAGSYPPTV------------------AAVEDATTMWPSMQDLNTRLRRV 3261
                         ||:||:.|...                  ||.|.|..:              
Mouse  1890 AECLAESHQHLSKESLAGNKPANAVLHKGKGRGGPARGRAHNAASEPAGGI-------------- 1940

  Fly  3262 ITAYQRNYKKEELKLQQKAKLQALVSSTPPLSVPTTPTLQSMQMQLQSGSGSG------------ 3314
                   .::.|.:....|  ...|.:||..|.|:....|..|...|.|.|:.            
Mouse  1941 -------AERHEGRCDPPA--SHAVPNTPHRSPPSDVRAQHPQPAGQQGHGASPHTGLSPGSLRH 1996

  Fly  3315 GSGIGSSAQ---HDASGRSLQALMQSQGASTSAAAAAAASSAGGSCSGSGQVGMGGAGVMPA 3373
            .||:..|.|   ....||..:.|..........:.....||||....|:|    ||.|:..|
Mouse  1997 TSGVRGSLQRRTRRGPGRRRRQLQPDACRVLHHSHHQRPSSAGEEREGNG----GGVGIRRA 2054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171 43/183 (23%)
PTZ00121 <1419..1923 CDD:173412 120/631 (19%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 27/143 (19%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 24/91 (26%)
PLN03142 2029..>2606 CDD:215601 272/617 (44%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Chd3XP_017169944.1 CHDNT 200..253 CDD:462357 10/67 (15%)
PHD1_CHD_II 434..476 CDD:277006 5/41 (12%)
PHD2_CHD_II 510..552 CDD:277007 2/41 (5%)
CD1_tandem_CHD3-4_like 557..635 CDD:349314 17/81 (21%)
CD2_tandem_CHD3-4_like 680..734 CDD:349309 20/54 (37%)
PLN03142 771..>1325 CDD:215601 262/569 (46%)
DEXHc_CHD3 788..1019 CDD:350813 109/230 (47%)
DUF1087 <1366..1409 CDD:461922 10/49 (20%)
CHDII_SANT-like 1430..1569 CDD:461920 42/273 (15%)
PHA03169 1589..>1759 CDD:223003 40/218 (18%)
CHDCT2 1791..1917 CDD:462358 19/140 (14%)
Blue background indicates that the domain is not in the aligned region.

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