DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and Smarca4

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_011240739.1 Gene:Smarca4 / 20586 MGIID:88192 Length:1670 Species:Mus musculus


Alignment Length:2164 Identity:516/2164 - (23%)
Similarity:792/2164 - (36%) Gaps:678/2164 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1005 QDDLQE--KPTAEMEQTQLGQSLGDLSKSLLEEPKTVEESGED-KSQSAPGVAPPADPIIPVTQP 1066
            ||::.:  ||...|.:           |.:.::|:..:..|.. :|.:..|:|||..   |:.|.
Mouse    86 QDNMHQMHKPMESMHE-----------KGMPDDPRYNQMKGMGMRSGAHTGMAPPPS---PMDQH 136

  Fly  1067 PQQQMPPIGMPMHPIAPGYEAQAQGQGHMPPMMPPYGGAP--GMYPPYPMLHQQEIAAL---QQQ 1126
            .|....|:|...|..:|   ..|.|....|.|....||||  |..|  ..|.||.....   |.|
Mouse   137 SQGYPSPLGGSEHASSP---VPASGPSSGPQMSSGPGGAPLDGSDP--QALGQQNRGPTPFNQNQ 196

  Fly  1127 IQELYCMPPGHELQHQDKLMRMQERLNLLTQHEVNDQCAGGPQCLLFQNVPPMYGPPGNPLLNQQ 1191
            :         |:|:.|....:|..|...|..|          ..:..|...||   ||   :.||
Mouse   197 L---------HQLRAQIMAYKMLARGQPLPDH----------LQMAVQGKRPM---PG---MQQQ 236

  Fly  1192 MVESPQVS-STTGRGRGKSANKPRKPRAKKGEKAQVGQQQDLMDISGNVAMGAANAVSSIPTTQL 1255
            |...|..| |.||.|.|........|                         |.|....|.|    
Mouse   237 MPTLPPPSVSATGPGPGPGPGPGPGP-------------------------GPAPPNYSRP---- 272

  Fly  1256 PVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKKKKPRKPR--TPKDPNK 1318
                                   .|||                   |....|..|.  .|..|.:
Mouse   273 -----------------------HGMG-------------------GPNMPPPGPSGVPPGMPGQ 295

  Fly  1319 PPRDRTPKAKKPKDP--NDPNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPK 1381
            ||..  |....|:.|  |....|.||..:..               .:.||..|..   .|.||.
Mouse   296 PPGG--PPKPWPEGPMANAAAPTSTPQKLIP---------------PQPTGRPSPA---PPAVPP 340

  Fly  1382 AGSADGEAETTSGGTGVDGESPDYDDIPVSKIPRGSNEDEKEAEAGDETVDSVPDSAG-DPASTP 1445
            |.|.....:|         :||.....|...:|....:..         :..:....| ||....
Mouse   341 AASPVMPPQT---------QSPGQPAQPAPLVPLHQKQSR---------ITPIQKPRGLDPVEIL 387

  Fly  1446 SRRDRKRSTARSRR-----NANSEEGGSARKNRGSLSAKALK----KRRNRGRIVPESDGEDDTL 1501
            ..|:.:.....:.|     |......|..| .:.::..|||:    :|:.|..:|          
Mouse   388 QEREYRLQARIAHRIQELENLPGSLAGDLR-TKATIELKALRLLNFQRQLRQEVV---------- 441

  Fly  1502 DRTPPPSPPPDSEMDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKDKKPSANASNSN 1566
                                             |.:|......:.|.|...|:.|:.|...:.. 
Mouse   442 ---------------------------------VCMRRDTALETALNAKAYKRSKRQSLREARI- 472

  Fly  1567 AGSDVEKTEPQSGAEGD-AAQEVGEEKSNLPLDESSQLEA--SSSTSAVAEKERQISTDAANAAM 1628
                .||.|.|...|.: ..::..:|..|..|..:.....  .|.|..:.:..:.::|..||...
Mouse   473 ----TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTER 533

  Fly  1629 SSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDE 1693
            ..|..    |...|...:.:|:.....|.|:||         :.|:|:..:.|.:.|        
Mouse   534 EQKKE----NERIEKERMRRLMAEDEEGYRKLI---------DQKKDKRLAYLLQQT-------- 577

  Fly  1694 KFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESK 1758
                 .|...:||   |...:..|.:| :||:.:....||::........:..|.          
Mouse   578 -----DEYVANLT---ELVRQHKAAQV-AKEKKKKKKKKKAENAEGQTPAIGPDG---------- 623

  Fly  1759 PEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEKST 1823
             |...||.:..:....:...:|..:||...|             .||...::.:....|.:....
Mouse   624 -EPLDETSQMSDLPVKVIHVESGKILTGTDA-------------PKAGQLEAWLEMNPGYEVAPR 674

  Fly  1824 DDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKYRN 1888
            .||                          |||..:|.:|:.|.:.....:|..:.|||       
Mouse   675 SDS--------------------------EESGSEEEEEEEEEEQPQPAQPPTLPVEE------- 706

  Fly  1889 FSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTD 1953
                                 ..||                  .:|.:.|.:|||          
Mouse   707 ---------------------KKKI------------------PDPDSDDVSEVD---------- 722

  Fly  1954 ETSGETTKHYLVKWKSLPYEDCTWELEEDVDND-KIEQYLRFNKIPQRSEWKSKKRPHPELWKKL 2017
                  .:|.:...|            :|||:: .:.|.|      .|.........| .:.:::
Mouse   723 ------ARHIIENAK------------QDVDDEYGVSQAL------ARGLQSYYAVAH-AVTERV 762

  Fly  2018 EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEY-GIRGPFL 2081
            :|.........|:.||::||.||...:.|..|.|||||||||||||::..:..:.|: .|.||||
Mouse   763 DKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFL 827

  Fly  2082 VIAPLSTIPNWQREFEGWTDMNV-VVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTF 2145
            :|.||||:.||..||:.|....| |.|.||..:::     .:..:..||       |||||:||:
Mouse   828 IIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR-----AFVPQLRSG-------KFNVLLTTY 880

  Fly  2146 EMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEH----RVLLSGTPLQNNISELF 2206
            |.|:.|...|....|:..::||.||:||.:|||.:   .||..:    |:||:||||||.:.||:
Mouse   881 EYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQ---VLNTHYVAPRRLLLTGTPLQNKLPELW 942

  Fly  2207 SLLNFLEPSQFSSQEEFMSEFGS----------LRTEEE---VNKLQALLKPMMLRRLKDDVEKS 2258
            :|||||.|:.|.|...|...|.:          |..||.   :.:|..:|:|.:|||||.:||..
Mouse   943 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ 1007

  Fly  2259 LAPKEETIIEVELTNIQKKYYR-----GIL-----EQNFSFLKKGTTSANIPNLMNTMMELRKCC 2313
            |..|.|.:|:.:::.:|:..||     |:|     |::    |||  ......||||:|:|||.|
Mouse  1008 LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD----KKG--KGGTKTLMNTIMQLRKIC 1066

  Fly  2314 IHPYLLNGAEEQIQYDFKSQH---------GEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRV 2369
            .|||:....||..     |:|         |.|       |..::||..|:|::||||:|..|:|
Mouse  1067 NHPYMFQHIEESF-----SEHLGFTGGIVQGLD-------LYRASGKFELLDRILPKLRATNHKV 1119

  Fly  2370 LIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGIN 2434
            |:|.||...:.|:|||..||.:.:.|:||..:...|...:..:::|||:.|:|||.|:|||||:|
Mouse  1120 LLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLN 1184

  Fly  2435 LTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVL 2499
            |.:||||||:||||||..|||||.|.|||||:..|::.||...|:.|.::...|..||.:|:.|:
Mouse  1185 LQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1249

  Fly  2500 QSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEK 2564
            |:    |..|   ::.|..|....|:     |:::.:       |:|              ||..
Mouse  1250 QA----GMFD---QKSSSHERRAFLQ-----AILEHE-------EQD--------------ESRH 1281

  Fly  2565 GSTFS-KASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGH 2628
            .||.| .||||.       |...|         ..::||           |.||..:       .
Mouse  1282 CSTGSGSASFAH-------TAPPP---------AGVNPD-----------LEEPPLK-------E 1312

  Fly  2629 EDVMELNSEESSNE---NSDEEGGIGLR---SRRRKEKRDRAREKKGNDEYIPRERDALAALGLE 2687
            ||  |:..:|:.|:   ..:||..:.:|   .|||:|.|:            |:.:..|    :|
Mouse  1313 ED--EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARN------------PKRKPRL----ME 1359

  Fly  2688 EIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFKRGWR---DVDVEDCARIILLYCLQVYKG 2749
            |.:..:|...:..:||:        ...|..|...|.||.|   :||..|..             
Mouse  1360 EDELPSWIIKDDAEVER--------LTCEEEEEKMFGRGSRHRKEVDYSDSL------------- 1403

  Fly  2750 DEK--IKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKESTGVSTPAPGSASGSNS 2812
            .||  :||     :...|:|.:::|..:        .|.:...:..|..             |.:
Mouse  1404 TEKQWLKT-----LKAIEEGTLEEIEEE--------VRQKKSSRKRKRD-------------SEA 1442

  Fly  2813 GNTTPAHKSSALDGSDKDSGGINASAVAAAVTSIHDPNHWSKKEKYDADAYLEGAYK-KHLGRHA 2876
            |::||...:.:.|..::...........|...|.:.|| .:||.|...||.::  || ...||..
Mouse  1443 GSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPN-LTKKMKKIVDAVIK--YKDSSSGRQL 1504

  Fly  2877 NKVLLRVRML-----YY--IQHEVIGDFVQQIKD---NTPISELPIRPPPTPDQVPSSWWNPICC 2931
            ::|.:::...     ||  |:..|  || ::||:   |.....|                |.:..
Mouse  1505 SEVFIQLPSRKELPEYYELIRKPV--DF-KKIKERIRNHKYRSL----------------NDLEK 1550

  Fly  2932 DKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPIN-------EDDANSKH-D 2988
            |..||       |:..:....:.:|.:         .|.:.:.|:..:       |||:..:. :
Mouse  1551 DVMLL-------CQNAQTFNLEGSLIY---------EDSIVLQSVFTSVRQKIEKEDDSEGEESE 1599

  Fly  2989 DGDEVDDDGTTTTKDSDSTKLTGGDN---KDSLLDPERPSSSGKSSSENASGGNDKTESENDATT 3050
            :.:|.:::|:.:...|...|:..|..   :|.|....|..|.|..:....|..:.:.|.|.|.: 
Mouse  1600 EEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRS- 1663

  Fly  3051 VSESSYKSEVLPGKGSDLD 3069
                        |.||:.|
Mouse  1664 ------------GSGSEED 1670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941 50/214 (23%)
PRK12678 1319..>1500 CDD:237171 36/192 (19%)
PTZ00121 <1419..1923 CDD:173412 81/516 (16%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 12/66 (18%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 11/58 (19%)
PLN03142 2029..>2606 CDD:215601 229/615 (37%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Smarca4XP_011240739.1 Med15 62..>237 CDD:312941 48/194 (25%)
QLQ 191..225 CDD:462622 9/52 (17%)
Smc <384..>590 CDD:440809 47/283 (17%)
HSA 480..552 CDD:214727 13/75 (17%)
BRK 632..676 CDD:197800 7/56 (13%)
DEXHc_SMARCA4 751..1001 CDD:350820 100/265 (38%)
PLN03142 770..>1252 CDD:215601 208/518 (40%)
SnAC 1342..1409 CDD:464219 23/103 (22%)
Bromo_SNF2L2 1481..1587 CDD:99947 28/142 (20%)
Blue background indicates that the domain is not in the aligned region.

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